Transcript: Apobec1-005 OTTMUST00000139591.2

Description

apolipoprotein B editing complex 1

Location

Chromosome 6: 122,581,456-122,600,358 reverse strand.

About this transcript

This transcript has 6 exons and is annotated with 6 domains and features.

Gene

This transcript is a product of gene OTTMUSG00000024356 Show transcript tableHide transcript table

Name	Transcript ID	bp	Protein	Translation ID	Biotype	CCDS	UniProt	Flags
Apobec1-001	OTTMUST00000059665.1	2265	229aa	OTTMUSP00000029041	<p>Genes and/or transcript that contains an open reading frame (ORF).</p>Protein coding	CCDS20498	Q3U9G8
Apobec1-002	OTTMUST00000059666.1	2127	229aa	OTTMUSP00000029042	<p>Genes and/or transcript that contains an open reading frame (ORF).</p>Protein coding	CCDS20498	Q3U9G8
Apobec1-005	OTTMUST00000139591.2	775	113aa	OTTMUSP00000073230	<p>Genes and/or transcript that contains an open reading frame (ORF).</p>Protein coding	-	A0A0N4SVL6	3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete
Apobec1-006	OTTMUST00000139590.2	666	121aa	OTTMUSP00000073229	<p>Genes and/or transcript that contains an open reading frame (ORF).</p>Protein coding	-	A0A0N4SW85	3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete
Apobec1-007	OTTMUST00000139592.2	372	43aa	OTTMUSP00000073231	<p>Genes and/or transcript that contains an open reading frame (ORF).</p>Protein coding	-	A0A0N4SV86	3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete
Apobec1-003	OTTMUST00000059667.2	360	25aa	OTTMUSP00000029043	<p>Genes and/or transcript that contains an open reading frame (ORF).</p>Protein coding	-	D3Z675	3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete
Apobec1-004	OTTMUST00000059668.1	560	No protein	-	<p>Alternatively spliced transcript that is believed to contain intronic sequence relative to other coding transcripts in a given locus.</p>Retained intron	-	-
Apobec1-008	OTTMUST00000139593.1	520	No protein	-	<p>Alternatively spliced transcript that is believed to contain intronic sequence relative to other coding transcripts in a given locus.</p>Retained intron	-	-

Summary

Statistics

Exons: 6 Transcript length: 775 bps Translation length: 113 residues

Class

Known protein coding [Definition]

Author

This transcript was annotated by Havana

Version & date

Version 2, last modified on 10/07/2015 (Created on 10/03/2015)

Alternative symbols

RP24-68I7.2-005

Remarks

alternative 5' UTR

CDS end not found

mRNA end not found

Other assemblies

This transcript maps to 122,581,456-122,600,358 in GRCm38 (Ensembl) coordinates.

Jump to this stable ID in Ensembl

Alternative transcripts

Ensembl transcript having exact match with Havana:	ENSMUST00000203204

Curation Method

Manual annotation from Havana

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Recent locations

Transcript: Apobec1-005 OTTMUST00000139591.2

Summary

Transcript-based displays