Transcript: Hnrnpdl-002 OTTMUST00000060581.2

Description

heterogeneous nuclear ribonucleoprotein D-like

Location

Chromosome 5: 100,035,426-100,038,895 reverse strand.

About this transcript

This transcript has 8 exons and is annotated with 2 domains and features.

Gene

This transcript is a product of gene OTTMUSG00000024644 Show transcript tableHide transcript table

Name	Transcript ID	bp	Protein	Translation ID	Biotype	CCDS	UniProt	Flags
Hnrnpdl-001	OTTMUST00000060580.1	2752	420aa	OTTMUSP00000029556	<p>Genes and/or transcript that contains an open reading frame (ORF).</p>Protein coding	CCDS19460	D3YTQ3
Hnrnpdl-004	OTTMUST00000060583.1	2374	323aa	OTTMUSP00000029559	<p>Genes and/or transcript that contains an open reading frame (ORF).</p>Protein coding	-	F6VQH5	5' truncation in transcript evidence prevents annotation of the start of the CDS.CDS 5' incomplete
Hnrnpdl-003	OTTMUST00000060582.1	2149	420aa	OTTMUSP00000029558	Transcript is thought to undergo nonsense mediated decay, a process which detects nonsense mutations and prevents the expression of truncated or erroneous proteins. Nonsense mediated decay	CCDS19460	D3YTQ3
Hnrnpdl-002	OTTMUST00000060581.2	1477	100aa	OTTMUSP00000029557	Transcript is thought to undergo nonsense mediated decay, a process which detects nonsense mutations and prevents the expression of truncated or erroneous proteins. Nonsense mediated decay	-	-	5' truncation in transcript evidence prevents annotation of the start of the CDS.CDS 5' incomplete
Hnrnpdl-007	OTTMUST00000060586.1	1842	No protein	-	<p>Transcripts that don't contain an open reading frame (ORF) and cannot be placed in one of the other categories.</p>Processed transcript	-	-
Hnrnpdl-006	OTTMUST00000060585.1	884	No protein	-	<p>Alternatively spliced transcript that is believed to contain intronic sequence relative to other coding transcripts in a given locus.</p>Retained intron	-	-
Hnrnpdl-005	OTTMUST00000060584.1	846	No protein	-	<p>Alternatively spliced transcript that is believed to contain intronic sequence relative to other coding transcripts in a given locus.</p>Retained intron	-	-

Summary

Statistics

Exons: 8 Transcript length: 1,477 bps Translation length: 100 residues

Class

nonsense mediated decay [Definition]

Author

This transcript was annotated by Havana

Version & date

Version 2, last modified on 10/03/2012 (Created on 16/04/2007)

Alternative symbols

AC124480.1-002

Remarks

CDS start not found

mRNA start not found

Other assemblies

This transcript maps to 100,035,426-100,038,895 in GRCm38 (Ensembl) coordinates.

Jump to this stable ID in Ensembl

Alternative transcripts

Ensembl transcript having exact match with Havana:	ENSMUST00000149384

Curation Method

Manual annotation from Havana

Select a species

Recent locations

Transcript: Hnrnpdl-002 OTTMUST00000060581.2

Summary

Transcript-based displays