Transcript: Unc5c-001 OTTMUST00000062296.2

Description

unc-5 homolog C (C. elegans)

Location

Chromosome 3: 141,465,216-141,834,924 forward strand.

About this transcript

This transcript has 16 exons and is annotated with 35 domains and features.

Gene

This transcript is a product of gene OTTMUSG00000025311 Show transcript tableHide transcript table

Name	Transcript ID	bp	Protein	Translation ID	Biotype	CCDS	UniProt
Unc5c-001	OTTMUST00000062296.2	9646	931aa	OTTMUSP00000030690	<p>Genes and/or transcript that contains an open reading frame (ORF).</p>Protein coding	CCDS17873	O08747
Unc5c-002	OTTMUST00000062297.1	3890	950aa	OTTMUSP00000030691	<p>Genes and/or transcript that contains an open reading frame (ORF).</p>Protein coding	CCDS80034	Q3UQ08
Unc5c-003	OTTMUST00000062298.1	3595	876aa	OTTMUSP00000030692	<p>Genes and/or transcript that contains an open reading frame (ORF).</p>Protein coding	-	E9PVI4
Unc5c-005	OTTMUST00000062300.1	3498	950aa	OTTMUSP00000030693	Transcript is thought to undergo nonsense mediated decay, a process which detects nonsense mutations and prevents the expression of truncated or erroneous proteins. Nonsense mediated decay	CCDS80034	Q3UQ08
Unc5c-006	OTTMUST00000062301.1	357	No protein	-	<p>Transcripts that don't contain an open reading frame (ORF) and cannot be placed in one of the other categories.</p>Processed transcript	-	-
Unc5c-008	OTTMUST00000133695.2	5330	No protein	-	<p>Alternatively spliced transcript that is believed to contain intronic sequence relative to other coding transcripts in a given locus.</p>Retained intron	-	-
Unc5c-004	OTTMUST00000062299.2	4577	No protein	-	<p>Alternatively spliced transcript that is believed to contain intronic sequence relative to other coding transcripts in a given locus.</p>Retained intron	-	-
Unc5c-007	OTTMUST00000062302.1	417	No protein	-	<p>Alternatively spliced transcript that is believed to contain intronic sequence relative to other coding transcripts in a given locus.</p>Retained intron	-	-

Summary

Statistics

Exons: 16 Transcript length: 9,646 bps Translation length: 931 residues

CCDS

This transcript is a member of the Mouse CCDS set: CCDS17873

Class

Known protein coding [Definition]

Author

This transcript was annotated by Havana

Version & date

Version 2, last modified on 15/09/2014 (Created on 15/05/2007)

Alternative symbols

AC158552.1-001

Remarks

A530047I03Rik

CAGE supported TSS

Other assemblies

This transcript maps to 141,465,216-141,834,924 in GRCm38 (Ensembl) coordinates.

Jump to this stable ID in Ensembl

Alternative transcripts

Ensembl transcript having exact match with Havana:	ENSMUST00000106236

Curation Method

Manual annotation from Havana

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Recent locations

Transcript: Unc5c-001 OTTMUST00000062296.2

Summary

Transcript-based displays