Transcript: Ssh1-004 OTTMUST00000063589.1

Description

slingshot homolog 1 (Drosophila)

Location

About this transcript

This transcript has 5 exons and is annotated with 1 domain and feature.

Gene

Name	Transcript ID	bp	Protein	Translation ID	Biotype	CCDS	UniProt	Flags
Ssh1-001	OTTMUST00000063535.1	8436	1042aa	OTTMUSP00000031415	<p>Genes and/or transcript that contains an open reading frame (ORF).</p>Protein coding	CCDS19556	Q76I79
Ssh1-002	OTTMUST00000063587.1	5584	1020aa	OTTMUSP00000031447	<p>Genes and/or transcript that contains an open reading frame (ORF).</p>Protein coding	-	-
Ssh1-003	OTTMUST00000063588.1	3164	999aa	OTTMUSP00000031448	<p>Genes and/or transcript that contains an open reading frame (ORF).</p>Protein coding	-	F8WHT2
Ssh1-005	OTTMUST00000063590.1	464	76aa	OTTMUSP00000031450	<p>Genes and/or transcript that contains an open reading frame (ORF).</p>Protein coding	-	F7CBJ9	5' truncation in transcript evidence prevents annotation of the start of the CDS.CDS 5' incomplete
Ssh1-004	OTTMUST00000063589.1	418	37aa	OTTMUSP00000031449	Transcript is thought to undergo nonsense mediated decay, a process which detects nonsense mutations and prevents the expression of truncated or erroneous proteins. Nonsense mediated decay	-	-
Ssh1-006	OTTMUST00000063591.1	419	No protein	-	<p>Alternatively spliced transcript that is believed to contain intronic sequence relative to other coding transcripts in a given locus.</p>Retained intron	-	-

Summary

Statistics

Exons: 5 Transcript length: 418 bps Translation length: 37 residues

Class

nonsense mediated decay [Definition]

Author

This transcript was annotated by Havana

Version & date

Version 1, last modified on 01/10/2013 (Created on 06/06/2007)

Alternative symbols

RP23-371A1.2-004

Other assemblies

This transcript maps to 113,961,393-113,993,827 in GRCm38 (Ensembl) coordinates.

Jump to this stable ID in Ensembl

Alternative transcripts

Ensembl transcript having exact match with Havana:	ENSMUST00000159510

Curation Method

Manual annotation from Havana