Transcript: Aldh1l1-007 OTTMUST00000142079.2

Description

aldehyde dehydrogenase 1 family, member L1

Location

About this transcript

This transcript has 4 exons and is annotated with 6 domains and features.

Gene

Name	Transcript ID	bp	Protein	Translation ID	Biotype	CCDS	UniProt	Flags
Aldh1l1-001	OTTMUST00000064096.1	4175	902aa	OTTMUSP00000031787	<p>Genes and/or transcript that contains an open reading frame (ORF).</p>Protein coding	CCDS20361	Q8R0Y6
Aldh1l1-002	OTTMUST00000064097.2	3052	902aa	OTTMUSP00000031788	<p>Genes and/or transcript that contains an open reading frame (ORF).</p>Protein coding	CCDS20361	Q8R0Y6
Aldh1l1-007	OTTMUST00000142079.2	556	135aa	OTTMUSP00000074170	<p>Genes and/or transcript that contains an open reading frame (ORF).</p>Protein coding	-	A0A0N4SVT2	3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete
Aldh1l1-006	OTTMUST00000142080.2	3025	359aa	OTTMUSP00000074171	Transcript is thought to undergo nonsense mediated decay, a process which detects nonsense mutations and prevents the expression of truncated or erroneous proteins. Nonsense mediated decay	-	A0A0N4SW56
Aldh1l1-003	OTTMUST00000064098.3	472	No protein	-	<p>Transcripts that don't contain an open reading frame (ORF) and cannot be placed in one of the other categories.</p>Processed transcript	-	-
Aldh1l1-005	OTTMUST00000064130.1	400	No protein	-	<p>Transcripts that don't contain an open reading frame (ORF) and cannot be placed in one of the other categories.</p>Processed transcript	-	-
Aldh1l1-004	OTTMUST00000064099.3	653	No protein	-	<p>Alternatively spliced transcript that is believed to contain intronic sequence relative to other coding transcripts in a given locus.</p>Retained intron	-	-

Summary

Statistics

Exons: 4 Transcript length: 556 bps Translation length: 135 residues

Class

Novel protein coding [Definition]

Author

This transcript was annotated by Havana

Version & date

Version 2, last modified on 01/09/2015 (Created on 04/06/2015)

Alternative symbols

RP24-457L7.1-007

Remarks

CDS end not found

mRNA end not found

Other assemblies

This transcript maps to 90,550,843-90,559,961 in GRCm38 (Ensembl) coordinates.

Jump to this stable ID in Ensembl

Alternative transcripts

Ensembl transcript having exact match with Havana:	ENSMUST00000203111

Curation Method

Manual annotation from Havana