Transcript: Gbas-006 OTTMUST00000137239.1

Description

glioblastoma amplified sequence

Location

About this transcript

This transcript has 8 exons and is annotated with 5 domains and features.

Gene

Name	Transcript ID	bp	Protein	Translation ID	Biotype	CCDS	UniProt
Gbas-001	OTTMUST00000068386.1	2112	281aa	OTTMUSP00000034566	<p>Genes and/or transcript that contains an open reading frame (ORF).</p>Protein coding	CCDS19698	Q7TMG8
Gbas-005	OTTMUST00000137240.1	2219	No protein	-	<p>Error in the sequence in a public database (for example UniProtKB, NCBI RefSeq). Annotation is by the <a rel="external" href="http://vega.sanger.ac.uk/info/about/gene_and_transcript_types.html">VEGA/Havana</a> project.</p>Artifact	-	-
Gbas-002	OTTMUST00000068387.1	1600	281aa	OTTMUSP00000034567	Transcript is thought to undergo nonsense mediated decay, a process which detects nonsense mutations and prevents the expression of truncated or erroneous proteins. Nonsense mediated decay	CCDS19698	Q7TMG8
Gbas-006	OTTMUST00000137239.1	905	111aa	OTTMUSP00000072310	Transcript is thought to undergo nonsense mediated decay, a process which detects nonsense mutations and prevents the expression of truncated or erroneous proteins. Nonsense mediated decay	-	-
Gbas-003	OTTMUST00000068388.1	183	No protein	-	<p>Transcripts that don't contain an open reading frame (ORF) and cannot be placed in one of the other categories.</p>Processed transcript	-	-
Gbas-004	OTTMUST00000068389.1	871	No protein	-	<p>Alternatively spliced transcript that is believed to contain intronic sequence relative to other coding transcripts in a given locus.</p>Retained intron	-	-

Summary

Statistics

Exons: 8 Transcript length: 905 bps Translation length: 111 residues

Class

nonsense mediated decay [Definition]

Author

This transcript was annotated by Havana

Version & date

Version 1, last modified on 10/12/2014 (Created on 10/12/2014)

Alternative symbols

AC120413.1-006

Other assemblies

This transcript maps to 129,725,101-129,757,373 in GRCm38 (Ensembl) coordinates.

Jump to this stable ID in Ensembl

Alternative transcripts

Ensembl transcript having exact match with Havana:	ENSMUST00000195946

Curation Method

Manual annotation from Havana