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Description

LIM and calponin homology domains 1

Location
About this transcript

This transcript has 5 exons and is annotated with 2 domains and features.

NameTranscript IDbpProteinTranslation IDBiotypeCCDSUniProtFlags
Limch1-001OTTMUST00000069449.45903901aaOTTMUSP00000035270
 
Protein coding
CCDS57347-
Limch1-004OTTMUST00000069459.551921057aaOTTMUSP00000035276
 
Protein coding
CCDS39102Q3UH68
Limch1-013OTTMUST00000069543.450501068aaOTTMUSP00000035341
 
Protein coding
-D3YU22
Limch1-019OTTMUST00000138048.14185774aaOTTMUSP00000072635
 
Protein coding
-D3YU59 CDS 5' incomplete
Limch1-016OTTMUST00000138046.13157898aaOTTMUSP00000072634
 
Protein coding
-D3Z589
Limch1-008OTTMUST00000069515.5876268aaOTTMUSP00000035317
 
Protein coding
--CDS 3' incomplete
Limch1-007OTTMUST00000069514.2852237aaOTTMUSP00000035316
 
Protein coding
--CDS 3' incomplete
Limch1-006OTTMUST00000069513.352029aaOTTMUSP00000072633
 
Protein coding
--CDS 3' incomplete
Limch1-003OTTMUST00000069458.24371No protein-
 
Artifact
--
Limch1-012OTTMUST00000069542.143560aaOTTMUSP00000035340
 
Nonsense mediated decay
-F6W1Y9 CDS 5' incomplete
Limch1-005OTTMUST00000069512.136083aaOTTMUSP00000035315
 
Nonsense mediated decay
-D6RHT2
Limch1-018OTTMUST00000138047.13356No protein-
 
Processed transcript
--
Limch1-011OTTMUST00000069541.2735No protein-
 
Processed transcript
--
Limch1-009OTTMUST00000069516.1624No protein-
 
Processed transcript
--
Limch1-014OTTMUST00000138011.12538No protein-
 
Retained intron
--
Limch1-002OTTMUST00000069457.22458No protein-
 
Retained intron
--
Limch1-017OTTMUST00000138045.11018No protein-
 
Retained intron
--
Limch1-015OTTMUST00000138012.2786No protein-
 
Retained intron
--
Limch1-010OTTMUST00000069540.1680No protein-
 
Retained intron
--
Statistics

Exons: 5 Transcript length: 520 bps Translation length: 29 residues

Class

Putative protein coding [Definition]

Author

This transcript was annotated by Havana

Version & date

Version 3, last modified on 10/07/2015 (Created on 28/08/2007)

Alternative symbols

AC119834.1-006

Remarks

CDS end not found

mRNA end not found

Other assemblies

This transcript maps to 66,898,431-66,969,153 in GRCm38 (Ensembl) coordinates.

Jump to this stable ID in Ensembl

Alternative transcripts
Ensembl transcript having exact match with Havana:
Curation Method

Manual annotation from Havana

Transcript-based displays