Transcript: Hfm1-001 OTTMUST00000069725.1

Description

HFM1, ATP-dependent DNA helicase homolog (S. cerevisiae)

Location

About this transcript

This transcript has 39 exons and is annotated with 21 domains and features.

Gene

Name	Transcript ID	bp	Protein	Translation ID	Biotype	CCDS	UniProt	Flags
Hfm1-001	OTTMUST00000069725.1	4870	1434aa	OTTMUSP00000035455	<p>Genes and/or transcript that contains an open reading frame (ORF).</p>Protein coding	CCDS51582	D3Z4R1
Hfm1-005	OTTMUST00000069729.1	1928	626aa	OTTMUSP00000035458	<p>Genes and/or transcript that contains an open reading frame (ORF).</p>Protein coding	-	-	5' truncation in transcript evidence prevents annotation of the start of the CDS.CDS 5' incomplete
Hfm1-006	OTTMUST00000134106.2	1381	410aa	OTTMUSP00000071183	<p>Genes and/or transcript that contains an open reading frame (ORF).</p>Protein coding	-	A0A0G2JED3	3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete
Hfm1-004	OTTMUST00000069728.1	2613	49aa	OTTMUSP00000035457	Transcript is thought to undergo nonsense mediated decay, a process which detects nonsense mutations and prevents the expression of truncated or erroneous proteins. Nonsense mediated decay	-	-	5' truncation in transcript evidence prevents annotation of the start of the CDS.CDS 5' incomplete
Hfm1-002	OTTMUST00000069726.1	1440	57aa	OTTMUSP00000035456	Transcript is thought to undergo nonsense mediated decay, a process which detects nonsense mutations and prevents the expression of truncated or erroneous proteins. Nonsense mediated decay	-	-
Hfm1-003	OTTMUST00000069727.1	1959	No protein	-	<p>Alternatively spliced transcript that is believed to contain intronic sequence relative to other coding transcripts in a given locus.</p>Retained intron	-	-

Summary

Statistics

Exons: 39 Transcript length: 4,870 bps Translation length: 1,434 residues

CCDS

This transcript is a member of the Mouse CCDS set: CCDS51582

Class

Novel protein coding [Definition]

Author

This transcript was annotated by Havana

Version & date

Version 1, last modified on 20/02/2013 (Created on 30/08/2007)

Alternative symbols

AC137947.1-001

Other assemblies

This transcript maps to 106,840,194-106,926,321 in GRCm38 (Ensembl) coordinates.

Jump to this stable ID in Ensembl

Alternative transcripts

Ensembl transcript having exact match with Havana:	ENSMUST00000117588

Curation Method

Manual annotation from Havana