Transcript: Ccbe1-005 OTTMUST00000069918.1

Description

collagen and calcium binding EGF domains 1

Location

About this transcript

This transcript has 12 exons and is annotated with 21 domains and features.

Gene

Name	Transcript ID	bp	Protein	Translation ID	Biotype	CCDS	UniProt
Ccbe1-001	OTTMUST00000069908.1	1631	408aa	OTTMUSP00000035567	<p>Genes and/or transcript that contains an open reading frame (ORF).</p>Protein coding	CCDS29314	Q3MI99
Ccbe1-004	OTTMUST00000069917.1	3812	No protein	-	<p>Error in the sequence in a public database (for example UniProtKB, NCBI RefSeq). Annotation is by the <a rel="external" href="http://vega.sanger.ac.uk/info/about/gene_and_transcript_types.html">VEGA/Havana</a> project.</p>Artifact	-	-
Ccbe1-005	OTTMUST00000069918.1	5304	408aa	OTTMUSP00000035573	Transcript is thought to undergo nonsense mediated decay, a process which detects nonsense mutations and prevents the expression of truncated or erroneous proteins. Nonsense mediated decay	CCDS29314	Q3MI99
Ccbe1-003	OTTMUST00000069916.1	3261	No protein	-	<p>Transcripts that don't contain an open reading frame (ORF) and cannot be placed in one of the other categories.</p>Processed transcript	-	-
Ccbe1-002	OTTMUST00000069915.1	1836	No protein	-	<p>Transcripts that don't contain an open reading frame (ORF) and cannot be placed in one of the other categories.</p>Processed transcript	-	-

Summary

Statistics

Exons: 12 Transcript length: 5,304 bps Translation length: 408 residues

CCDS

This transcript is a member of the Mouse CCDS set: CCDS29314

Class

nonsense mediated decay [Definition]

Author

This transcript was annotated by Havana

Version & date

Version 1, last modified on 01/10/2013 (Created on 03/09/2007)

Alternative symbols

AC102243.1-005

Other assemblies

This transcript maps to 66,056,855-66,291,788 in GRCm38 (Ensembl) coordinates.

Jump to this stable ID in Ensembl

Alternative transcripts

Ensembl transcript having exact match with Havana:	ENSMUST00000061103

Curation Method

Manual annotation from Havana