Transcript: Lnx1-002 OTTMUST00000070838.2

Description

ligand of numb-protein X 1

Location

Chromosome 5: 74,592,679-74,677,858 reverse strand.

About this transcript

This transcript has 13 exons and is annotated with 2 domains and features.

Gene

This transcript is a product of gene OTTMUSG00000028588 Show transcript tableHide transcript table

Name	Transcript ID	bp	Protein	Translation ID	Biotype	CCDS	UniProt	Flags
Lnx1-001	OTTMUST00000070837.4	2727	628aa	OTTMUSP00000036164	<p>Genes and/or transcript that contains an open reading frame (ORF).</p>Protein coding	CCDS19347	A4QPD4
Lnx1-006	OTTMUST00000070842.3	2564	728aa	OTTMUSP00000036168	<p>Genes and/or transcript that contains an open reading frame (ORF).</p>Protein coding	CCDS51524	O70263
Lnx1-003	OTTMUST00000070839.1	2302	618aa	OTTMUSP00000036166	<p>Genes and/or transcript that contains an open reading frame (ORF).</p>Protein coding	CCDS51523	E9Q6Q0
Lnx1-004	OTTMUST00000070840.2	2259	628aa	OTTMUSP00000036167	<p>Genes and/or transcript that contains an open reading frame (ORF).</p>Protein coding	CCDS19347	A4QPD4
Lnx1-008	OTTMUST00000070873.3	2208	569aa	OTTMUSP00000036184	<p>Genes and/or transcript that contains an open reading frame (ORF).</p>Protein coding	CCDS51522	E9Q4N3
Lnx1-007	OTTMUST00000070874.2	966	322aa	OTTMUSP00000036185	<p>Genes and/or transcript that contains an open reading frame (ORF).</p>Protein coding	-	F7AT68	5' and 3' truncations in transcript evidence prevent annotation of the start and the end of the CDS.CDS 5' and 3' incomplete
Lnx1-005	OTTMUST00000070841.3	7041	No protein	-	<p>Error in the sequence in a public database (for example UniProtKB, NCBI RefSeq). Annotation is by the <a rel="external" href="http://vega.sanger.ac.uk/info/about/gene_and_transcript_types.html">VEGA/Havana</a> project.</p>Artifact	-	-
Lnx1-002	OTTMUST00000070838.2	2852	52aa	OTTMUSP00000036165	Transcript is thought to undergo nonsense mediated decay, a process which detects nonsense mutations and prevents the expression of truncated or erroneous proteins. Nonsense mediated decay	-	D6RHN7

Summary

Statistics

Exons: 13 Transcript length: 2,852 bps Translation length: 52 residues

Class

nonsense mediated decay [Definition]

Author

This transcript was annotated by Havana

Version & date

Version 2, last modified on 05/02/2015 (Created on 14/09/2007)

Alternative symbols

AC164523.1-002

Remarks

NAGNAG splice site

Other assemblies

This transcript maps to 74,592,679-74,677,858 in GRCm38 (Ensembl) coordinates.

Jump to this stable ID in Ensembl

Alternative transcripts

Ensembl transcript having exact match with Havana:	ENSMUST00000127396

Curation Method

Manual annotation from Havana

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Recent locations

Transcript: Lnx1-002 OTTMUST00000070838.2

Summary

Transcript-based displays