Transcript: Plekha4-010 OTTMUST00000145837.1

Description

pleckstrin homology domain containing, family A (phosphoinositide binding specific) member 4

Location

Chromosome 7: 45,549,889-45,554,163 forward strand.

About this transcript

This transcript has 2 exons and is annotated with 1 domain and feature.

Gene

This transcript is a product of gene OTTMUSG00000029145 Show transcript tableHide transcript table

Name	Transcript ID	bp	Protein	Translation ID	Biotype	CCDS	Flags
Plekha4-001	OTTMUST00000072288.1	2577	779aa	OTTMUSP00000037158	<p>Genes and/or transcript that contains an open reading frame (ORF).</p>Protein coding	CCDS52248
Plekha4-004	OTTMUST00000072291.1	2133	588aa	OTTMUSP00000037160	<p>Genes and/or transcript that contains an open reading frame (ORF).</p>Protein coding	-
Plekha4-005	OTTMUST00000072292.1	2044	612aa	OTTMUSP00000037161	<p>Genes and/or transcript that contains an open reading frame (ORF).</p>Protein coding	-
Plekha4-008	OTTMUST00000072295.2	646	82aa	OTTMUSP00000075983	<p>Genes and/or transcript that contains an open reading frame (ORF).</p>Protein coding	-	5' truncation in transcript evidence prevents annotation of the start of the CDS.CDS 5' incomplete
Plekha4-010	OTTMUST00000145837.1	476	94aa	OTTMUSP00000075984	<p>Genes and/or transcript that contains an open reading frame (ORF).</p>Protein coding	-	5' truncation in transcript evidence prevents annotation of the start of the CDS.CDS 5' incomplete
Plekha4-007	OTTMUST00000072294.1	356	56aa	OTTMUSP00000037162	<p>Genes and/or transcript that contains an open reading frame (ORF).</p>Protein coding	-	3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete
Plekha4-002	OTTMUST00000072289.1	1805	No protein	-	<p>Error in the sequence in a public database (for example UniProtKB, NCBI RefSeq). Annotation is by the <a rel="external" href="http://vega.sanger.ac.uk/info/about/gene_and_transcript_types.html">VEGA/Havana</a> project.</p>Artifact	-
Plekha4-003	OTTMUST00000072290.1	2655	480aa	OTTMUSP00000037159	Transcript is thought to undergo nonsense mediated decay, a process which detects nonsense mutations and prevents the expression of truncated or erroneous proteins. Nonsense mediated decay	-
Plekha4-009	OTTMUST00000145836.1	2415	No protein	-	<p>Alternatively spliced transcript that is believed to contain intronic sequence relative to other coding transcripts in a given locus.</p>Retained intron	-
Plekha4-006	OTTMUST00000072293.1	1457	No protein	-	<p>Alternatively spliced transcript that is believed to contain intronic sequence relative to other coding transcripts in a given locus.</p>Retained intron	-

Summary

Statistics

Exons: 2 Transcript length: 476 bps Translation length: 94 residues

Class

Putative protein coding [Definition]

Author

This transcript was annotated by Havana

Version & date

Version 1, last modified on 11/09/2015 (Created on 11/09/2015)

Alternative symbols

AC151602.12-010

Remarks

CDS start not found

mRNA start not found

Other assemblies

This transcript maps to 45,549,889-45,554,163 in GRCm38 (Ensembl) coordinates.

Jump to this stable ID in Ensembl

Alternative transcripts

Ensembl transcript having exact match with Havana:	ENSMUST00000211348

Curation Method

Manual annotation from Havana

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Recent locations

Transcript: Plekha4-010 OTTMUST00000145837.1

Summary

Transcript-based displays