Transcript: Egflam-002 OTTMUST00000072509.1

Description

EGF-like, fibronectin type III and laminin G domains

Location

About this transcript

This transcript has 22 exons and is annotated with 45 domains and features.

Gene

Name	Transcript ID	bp	Protein	Translation ID	Biotype	CCDS	UniProt
Egflam-002	OTTMUST00000072509.1	4778	1009aa	OTTMUSP00000037356	<p>Genes and/or transcript that contains an open reading frame (ORF).</p>Protein coding	CCDS27370	-
Egflam-001	OTTMUST00000072508.2	4391	1017aa	OTTMUSP00000037355	<p>Genes and/or transcript that contains an open reading frame (ORF).</p>Protein coding	CCDS79359	Q4VBE4
Egflam-003	OTTMUST00000072510.1	4420	37aa	OTTMUSP00000037357	Transcript is thought to undergo nonsense mediated decay, a process which detects nonsense mutations and prevents the expression of truncated or erroneous proteins. Nonsense mediated decay	-	-
Egflam-006	OTTMUST00000072516.1	446	No protein	-	<p>Transcripts that don't contain an open reading frame (ORF) and cannot be placed in one of the other categories.</p>Processed transcript	-	-
Egflam-004	OTTMUST00000072511.1	3327	No protein	-	<p>Alternatively spliced transcript that is believed to contain intronic sequence relative to other coding transcripts in a given locus.</p>Retained intron	-	-
Egflam-005	OTTMUST00000072515.1	618	No protein	-	<p>Alternatively spliced transcript that is believed to contain intronic sequence relative to other coding transcripts in a given locus.</p>Retained intron	-	-
Egflam-007	OTTMUST00000072517.1	490	No protein	-	<p>Alternatively spliced transcript that is believed to contain intronic sequence relative to other coding transcripts in a given locus.</p>Retained intron	-	-

Summary

Statistics

Exons: 22 Transcript length: 4,778 bps Translation length: 1,009 residues

CCDS

This transcript is a member of the Mouse CCDS set: CCDS27370

Class

Novel protein coding [Definition]

Author

This transcript was annotated by Havana

Version & date

Version 1, last modified on 01/10/2013 (Created on 16/10/2007)

Alternative symbols

AC158747.1-002

Remarks

5930412K08Rik

8030496C15Rik

A030011G10Rik

A630020F02Rik

isoform 2

Other assemblies

This transcript maps to 7,206,120-7,398,304 in GRCm38 (Ensembl) coordinates.

Jump to this stable ID in Ensembl

Alternative transcripts

Ensembl transcript having exact match with Havana:	ENSMUST00000058593

Curation Method

Manual annotation from Havana