Transcript: Egfem1-003 OTTMUST00000074400.1

Description

novel EGF-like protein (6130401L20Rik)

Location

Chromosome 3: 29,082,771-29,690,510 forward strand.

About this transcript

This transcript has 13 exons and is annotated with 52 domains and features.

Gene

This transcript is a product of gene OTTMUSG00000030000 Show transcript tableHide transcript table

Name	Transcript ID	bp	Protein	Translation ID	Biotype	CCDS	UniProt	Flags
Egfem1-001	OTTMUST00000074398.2	2687	590aa	OTTMUSP00000038716	<p>Genes and/or transcript that contains an open reading frame (ORF).</p>Protein coding	CCDS50881	B7ZCE7
Egfem1-003	OTTMUST00000074400.1	1779	533aa	OTTMUSP00000038717	<p>Genes and/or transcript that contains an open reading frame (ORF).</p>Protein coding	CCDS50882	-
Egfem1-004	OTTMUST00000074401.2	733	244aa	OTTMUSP00000038718	<p>Genes and/or transcript that contains an open reading frame (ORF).</p>Protein coding	-	F6ZMV2	5' and 3' truncations in transcript evidence prevent annotation of the start and the end of the CDS.CDS 5' and 3' incomplete
Egfem1-006	OTTMUST00000074403.2	559	176aa	OTTMUSP00000038720	<p>Genes and/or transcript that contains an open reading frame (ORF).</p>Protein coding	-	D3YYS1	3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete
Egfem1-005	OTTMUST00000074402.5	538	125aa	OTTMUSP00000038719	<p>Genes and/or transcript that contains an open reading frame (ORF).</p>Protein coding	-	-	3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete
Egfem1-007	OTTMUST00000074404.1	331	No protein	-	<p>Transcripts that don't contain an open reading frame (ORF) and cannot be placed in one of the other categories.</p>Processed transcript	-	-
Egfem1-002	OTTMUST00000074399.1	2722	No protein	-	<p>Alternatively spliced transcript that is believed to contain intronic sequence relative to other coding transcripts in a given locus.</p>Retained intron	-	-

Summary

Statistics

Exons: 13 Transcript length: 1,779 bps Translation length: 533 residues

CCDS

This transcript is a member of the Mouse CCDS set: CCDS50882

Class

Known protein coding [Definition]

Author

This transcript was annotated by Havana

Version & date

Version 1, last modified on 10/07/2015 (Created on 22/11/2007)

Alternative symbols

RP23-317I15.1-003

Other assemblies

This transcript maps to 29,082,771-29,690,510 in GRCm38 (Ensembl) coordinates.

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Alternative transcripts

Ensembl transcript having exact match with Havana:	ENSMUST00000118531

Curation Method

Manual annotation from Havana

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Recent locations

Transcript: Egfem1-003 OTTMUST00000074400.1

Summary

Transcript-based displays