Transcript: Piezo1-001 OTTMUST00000074732.1

Description

piezo-type mechanosensitive ion channel component 1

Location

Chromosome 8: 122,481,982-122,499,885 reverse strand.

About this transcript

This transcript has 40 exons and is annotated with 28 domains and features.

Gene

This transcript is a product of gene OTTMUSG00000030164 Show transcript tableHide transcript table

Name	Transcript ID	bp	Protein	Translation ID	Biotype	CCDS	UniProt	Flags
Piezo1-009	OTTMUST00000150918.1	8219	2547aa	OTTMUSP00000078273	<p>Genes and/or transcript that contains an open reading frame (ORF).</p>Protein coding	-	-
Piezo1-001	OTTMUST00000074732.1	6317	1003aa	OTTMUSP00000039015	Transcript is thought to undergo nonsense mediated decay, a process which detects nonsense mutations and prevents the expression of truncated or erroneous proteins. Nonsense mediated decay	-	F6QY99	5' truncation in transcript evidence prevents annotation of the start of the CDS.CDS 5' incomplete
Piezo1-002	OTTMUST00000074733.1	3538	1085aa	OTTMUSP00000039016	Transcript is thought to undergo nonsense mediated decay, a process which detects nonsense mutations and prevents the expression of truncated or erroneous proteins. Nonsense mediated decay	-	F6PYU5	5' truncation in transcript evidence prevents annotation of the start of the CDS.CDS 5' incomplete
Piezo1-010	OTTMUST00000150919.1	2860	No protein	-	<p>Alternatively spliced transcript that is believed to contain intronic sequence relative to other coding transcripts in a given locus.</p>Retained intron	-	-
Piezo1-006	OTTMUST00000074737.1	698	No protein	-	<p>Alternatively spliced transcript that is believed to contain intronic sequence relative to other coding transcripts in a given locus.</p>Retained intron	-	-
Piezo1-005	OTTMUST00000074736.1	519	No protein	-	<p>Alternatively spliced transcript that is believed to contain intronic sequence relative to other coding transcripts in a given locus.</p>Retained intron	-	-
Piezo1-004	OTTMUST00000074735.1	506	No protein	-	<p>Alternatively spliced transcript that is believed to contain intronic sequence relative to other coding transcripts in a given locus.</p>Retained intron	-	-
Piezo1-007	OTTMUST00000074738.1	429	No protein	-	<p>Alternatively spliced transcript that is believed to contain intronic sequence relative to other coding transcripts in a given locus.</p>Retained intron	-	-

Summary

Statistics

Exons: 40 Transcript length: 6,317 bps Translation length: 1,003 residues

Class

nonsense mediated decay [Definition]

Author

This transcript was annotated by Havana

Version & date

Version 1, last modified on 22/02/2016 (Created on 30/11/2007)

Alternative symbols

AC114917.2-001

Remarks

CDS start not found

mRNA start not found

Other assemblies

This transcript maps to 122,481,982-122,499,885 in GRCm38 (Ensembl) coordinates.

Jump to this stable ID in Ensembl

Alternative transcripts

Ensembl transcript having exact match with Havana:	ENSMUST00000128383

Curation Method

Manual annotation from Havana

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Recent locations

Transcript: Piezo1-001 OTTMUST00000074732.1

Summary

Transcript-based displays