Transcript: Sphkap-002 OTTMUST00000074977.3

Description

SPHK1 interactor, AKAP domain containing

Location

About this transcript

This transcript has 6 exons and is annotated with 9 domains and features.

Gene

Name	Transcript ID	bp	Protein	Translation ID	Biotype	CCDS	UniProt	Flags
Sphkap-001	OTTMUST00000074976.3	8154	1658aa	OTTMUSP00000039228	<p>Genes and/or transcript that contains an open reading frame (ORF).</p>Protein coding	CCDS48298	E9PUC4
Sphkap-002	OTTMUST00000074977.3	5888	1400aa	OTTMUSP00000039229	<p>Genes and/or transcript that contains an open reading frame (ORF).</p>Protein coding	-	-	5' truncation in transcript evidence prevents annotation of the start of the CDS.CDS 5' incomplete
Sphkap-003	OTTMUST00000074997.3	5757	No protein	-	<p>Alternatively spliced transcript that is believed to contain intronic sequence relative to other coding transcripts in a given locus.</p>Retained intron	-	-
Sphkap-005	OTTMUST00000075029.1	757	No protein	-	<p>Alternatively spliced transcript that is believed to contain intronic sequence relative to other coding transcripts in a given locus.</p>Retained intron	-	-
Sphkap-004	OTTMUST00000075028.1	316	No protein	-	<p>Alternatively spliced transcript that is believed to contain intronic sequence relative to other coding transcripts in a given locus.</p>Retained intron	-	-

Summary

Statistics

Exons: 6 Transcript length: 5,888 bps Translation length: 1,400 residues

Class

Novel protein coding [Definition]

Author

This transcript was annotated by Havana

Version & date

Version 3, last modified on 10/03/2012 (Created on 06/12/2007)

Alternative symbols

AC138359.2-002

Remarks

4930544G21Rik

CDS start not found

mRNA start not found

Other assemblies

This transcript maps to 83,255,442-83,279,165 in GRCm38 (Ensembl) coordinates.

Jump to this stable ID in Ensembl

Alternative transcripts

Ensembl transcript having exact match with Havana:	ENSMUST00000159078

Curation Method

Manual annotation from Havana