Transcript: Smpd2-001 OTTMUST00000075966.1

Description

sphingomyelin phosphodiesterase 2, neutral

Location

Chromosome 10: 41,487,172-41,490,340 reverse strand.

About this transcript

This transcript has 10 exons and is annotated with 10 domains and features.

Gene

This transcript is a product of gene OTTMUSG00000030684 Show transcript tableHide transcript table

Name	Transcript ID	bp	Protein	Translation ID	Biotype	CCDS	UniProt
Smpd2-001	OTTMUST00000075966.1	1602	419aa	OTTMUSP00000039914	<p>Genes and/or transcript that contains an open reading frame (ORF).</p>Protein coding	CCDS23805	O70572
Smpd2-008	OTTMUST00000075973.1	936	83aa	OTTMUSP00000039915	Transcript is thought to undergo nonsense mediated decay, a process which detects nonsense mutations and prevents the expression of truncated or erroneous proteins. Nonsense mediated decay	-	-
Smpd2-002	OTTMUST00000075967.1	4150	No protein	-	<p>Alternatively spliced transcript that is believed to contain intronic sequence relative to other coding transcripts in a given locus.</p>Retained intron	-	-
Smpd2-004	OTTMUST00000075969.1	2749	No protein	-	<p>Alternatively spliced transcript that is believed to contain intronic sequence relative to other coding transcripts in a given locus.</p>Retained intron	-	-
Smpd2-003	OTTMUST00000075968.1	2365	No protein	-	<p>Alternatively spliced transcript that is believed to contain intronic sequence relative to other coding transcripts in a given locus.</p>Retained intron	-	-
Smpd2-005	OTTMUST00000075970.1	871	No protein	-	<p>Alternatively spliced transcript that is believed to contain intronic sequence relative to other coding transcripts in a given locus.</p>Retained intron	-	-
Smpd2-007	OTTMUST00000075972.1	828	No protein	-	<p>Alternatively spliced transcript that is believed to contain intronic sequence relative to other coding transcripts in a given locus.</p>Retained intron	-	-
Smpd2-006	OTTMUST00000075971.1	819	No protein	-	<p>Alternatively spliced transcript that is believed to contain intronic sequence relative to other coding transcripts in a given locus.</p>Retained intron	-	-
Smpd2-009	OTTMUST00000075974.1	441	No protein	-	<p>Alternatively spliced transcript that is believed to contain intronic sequence relative to other coding transcripts in a given locus.</p>Retained intron	-	-

Summary

Statistics

Exons: 10 Transcript length: 1,602 bps Translation length: 419 residues

CCDS

This transcript is a member of the Mouse CCDS set: CCDS23805

Class

Known protein coding [Definition]

Author

This transcript was annotated by Havana

Version & date

Version 1, last modified on 13/07/2016 (Created on 08/01/2008)

Alternative symbols

AC153360.2-001

Other assemblies

This transcript maps to 41,487,172-41,490,340 in GRCm38 (Ensembl) coordinates.

Jump to this stable ID in Ensembl

Alternative transcripts

Ensembl transcript having exact match with Havana:	ENSMUST00000019965

Curation Method

Manual annotation from Havana

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Recent locations

Transcript: Smpd2-001 OTTMUST00000075966.1

Summary

Transcript-based displays