Transcript: Cfap46-005 OTTMUST00000077827.1

Description

cilia and flagella associated protein 46

Location

Chromosome 7: 139,638,778-139,661,107 reverse strand.

About this transcript

This transcript has 19 exons and is annotated with 2 domains and features.

Gene

This transcript is a product of gene OTTMUSG00000031406 Show transcript tableHide transcript table

Name	Transcript ID	bp	Protein	Translation ID	Biotype	CCDS	UniProt	Flags
Cfap46-001	OTTMUST00000077823.2	8180	2641aa	OTTMUSP00000041244	<p>Genes and/or transcript that contains an open reading frame (ORF).</p>Protein coding	-	E9Q2C0
Cfap46-009	OTTMUST00000132587.1	849	164aa	OTTMUSP00000070675	<p>Genes and/or transcript that contains an open reading frame (ORF).</p>Protein coding	-	A0A0G2JGJ7	5' truncation in transcript evidence prevents annotation of the start of the CDS.CDS 5' incomplete
Cfap46-006	OTTMUST00000077828.2	774	226aa	OTTMUSP00000041247	<p>Genes and/or transcript that contains an open reading frame (ORF).</p>Protein coding	-	D3Z0A9	3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete
Cfap46-003	OTTMUST00000077825.2	4428	674aa	OTTMUSP00000041245	Transcript is thought to undergo nonsense mediated decay, a process which detects nonsense mutations and prevents the expression of truncated or erroneous proteins. Nonsense mediated decay	-	G3UVW5
Cfap46-005	OTTMUST00000077827.1	2981	343aa	OTTMUSP00000041246	Transcript is thought to undergo nonsense mediated decay, a process which detects nonsense mutations and prevents the expression of truncated or erroneous proteins. Nonsense mediated decay	-	D6RJ10
Cfap46-004	OTTMUST00000077826.1	3598	No protein	-	<p>Alternatively spliced transcript that is believed to contain intronic sequence relative to other coding transcripts in a given locus.</p>Retained intron	-	-
Cfap46-010	OTTMUST00000147997.1	1518	No protein	-	<p>Alternatively spliced transcript that is believed to contain intronic sequence relative to other coding transcripts in a given locus.</p>Retained intron	-	-
Cfap46-007	OTTMUST00000132588.1	1438	No protein	-	<p>Alternatively spliced transcript that is believed to contain intronic sequence relative to other coding transcripts in a given locus.</p>Retained intron	-	-
Cfap46-002	OTTMUST00000077824.1	1133	No protein	-	<p>Alternatively spliced transcript that is believed to contain intronic sequence relative to other coding transcripts in a given locus.</p>Retained intron	-	-

Summary

Statistics

Exons: 19 Transcript length: 2,981 bps Translation length: 343 residues

Class

nonsense mediated decay [Definition]

Author

This transcript was annotated by Havana

Version & date

Version 1, last modified on 10/03/2012 (Created on 14/02/2008)

Alternative symbols

AC141643.1-005

Other assemblies

This transcript maps to 139,638,778-139,661,107 in GRCm38 (Ensembl) coordinates.

Jump to this stable ID in Ensembl

Alternative transcripts

Ensembl transcript having exact match with Havana:	ENSMUST00000155075

Curation Method

Manual annotation from Havana

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Recent locations

Transcript: Cfap46-005 OTTMUST00000077827.1

Summary

Transcript-based displays