Transcript: Spic-004 OTTMUST00000078664.2

Description

Spi-C transcription factor (Spi-1/PU.1 related)

Location

About this transcript

This transcript has 6 exons and is annotated with 7 domains and features.

Gene

Name	Transcript ID	bp	Protein	Translation ID	Biotype	CCDS	UniProt	Flags
Spic-001	OTTMUST00000078661.1	1763	242aa	OTTMUSP00000041860	<p>Genes and/or transcript that contains an open reading frame (ORF).</p>Protein coding	CCDS36023	Q6P3D7
Spic-004	OTTMUST00000078664.2	646	167aa	OTTMUSP00000041862	<p>Genes and/or transcript that contains an open reading frame (ORF).</p>Protein coding	-	D3YYM5	3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete
Spic-002	OTTMUST00000078662.1	1356	113aa	OTTMUSP00000041861	Transcript is thought to undergo nonsense mediated decay, a process which detects nonsense mutations and prevents the expression of truncated or erroneous proteins. Nonsense mediated decay	-	D6RE28
Spic-003	OTTMUST00000078663.1	2290	No protein	-	<p>Alternatively spliced transcript that is believed to contain intronic sequence relative to other coding transcripts in a given locus.</p>Retained intron	-	-

Summary

Statistics

Exons: 6 Transcript length: 646 bps Translation length: 167 residues

Class

Known protein coding [Definition]

Author

This transcript was annotated by Havana

Version & date

Version 2, last modified on 10/07/2015 (Created on 03/03/2008)

Alternative symbols

RP23-64B8.1-004

Remarks

alternative 5' UTR

CDS end not found

mRNA end not found

Other assemblies

This transcript maps to 88,675,890-88,685,015 in GRCm38 (Ensembl) coordinates.

Jump to this stable ID in Ensembl

Alternative transcripts

Ensembl transcript having exact match with Havana:	ENSMUST00000138734

Curation Method

Manual annotation from Havana