Transcript: Pigk-002 OTTMUST00000078820.1

Description

phosphatidylinositol glycan anchor biosynthesis, class K

Location

Chromosome 3: 152,714,113-152,785,922 forward strand.

About this transcript

This transcript has 12 exons and is annotated with 16 domains and features.

Gene

This transcript is a product of gene OTTMUSG00000031801 Show transcript tableHide transcript table

Name	Transcript ID	bp	Protein	Translation ID	Biotype	CCDS	UniProt	Flags
Pigk-001	OTTMUST00000078819.2	4737	395aa	OTTMUSP00000041949	<p>Genes and/or transcript that contains an open reading frame (ORF).</p>Protein coding	CCDS17919	Q9CXY9
Pigk-002	OTTMUST00000078820.1	1761	442aa	OTTMUSP00000041950	<p>Genes and/or transcript that contains an open reading frame (ORF).</p>Protein coding	CCDS17920	Q8BL63
Pigk-006	OTTMUST00000078824.1	3641	364aa	OTTMUSP00000041953	Transcript is thought to undergo nonsense mediated decay, a process which detects nonsense mutations and prevents the expression of truncated or erroneous proteins. Nonsense mediated decay	-	Q8BXX3
Pigk-005	OTTMUST00000078823.1	2297	362aa	OTTMUSP00000041952	Transcript is thought to undergo nonsense mediated decay, a process which detects nonsense mutations and prevents the expression of truncated or erroneous proteins. Nonsense mediated decay	-	E9Q421
Pigk-004	OTTMUST00000078822.3	1097	33aa	OTTMUSP00000070995	Transcript is thought to undergo nonsense mediated decay, a process which detects nonsense mutations and prevents the expression of truncated or erroneous proteins. Nonsense mediated decay	-	-	5' truncation in transcript evidence prevents annotation of the start of the CDS.CDS 5' incomplete
Pigk-009	OTTMUST00000133627.1	920	92aa	OTTMUSP00000070994	Transcript is thought to undergo nonsense mediated decay, a process which detects nonsense mutations and prevents the expression of truncated or erroneous proteins. Nonsense mediated decay	-	A0A0G2JEZ9
Pigk-007	OTTMUST00000078825.1	415	No protein	-	<p>Transcripts that don't contain an open reading frame (ORF) and cannot be placed in one of the other categories.</p>Processed transcript	-	-
Pigk-008	OTTMUST00000079052.1	256	No protein	-	<p>Transcripts that don't contain an open reading frame (ORF) and cannot be placed in one of the other categories.</p>Processed transcript	-	-
Pigk-003	OTTMUST00000078821.1	1440	No protein	-	<p>Alternatively spliced transcript that is believed to contain intronic sequence relative to other coding transcripts in a given locus.</p>Retained intron	-	-

Summary

Statistics

Exons: 12 Transcript length: 1,761 bps Translation length: 442 residues

CCDS

This transcript is a member of the Mouse CCDS set: CCDS17920

Class

Known protein coding [Definition]

Author

This transcript was annotated by Havana

Version & date

Version 1, last modified on 12/09/2014 (Created on 05/03/2008)

Alternative symbols

AC162890.2-002

Remarks

B230361B22Rik

NP_821135

Other assemblies

This transcript maps to 152,714,113-152,785,922 in GRCm38 (Ensembl) coordinates.

Jump to this stable ID in Ensembl

Alternative transcripts

Ensembl transcript having exact match with Havana:	ENSMUST00000045029

Curation Method

Manual annotation from Havana

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Recent locations

Transcript: Pigk-002 OTTMUST00000078820.1

Summary

Transcript-based displays