Transcript: Mmp11-006 OTTMUST00000158639.1

Description

matrix metallopeptidase 11

Location

About this transcript

This transcript has 4 exons and is annotated with 5 domains and features.

Gene

Name	Transcript ID	bp	Protein	Translation ID	Biotype	CCDS	UniProt	Flags
Mmp11-001	OTTMUST00000078994.1	2288	492aa	OTTMUSP00000042090	<p>Genes and/or transcript that contains an open reading frame (ORF).</p>Protein coding	CCDS23937	Q3UQT3
Mmp11-002	OTTMUST00000078995.1	1793	492aa	OTTMUSP00000042091	<p>Genes and/or transcript that contains an open reading frame (ORF).</p>Protein coding	CCDS23937	Q3UQT3
Mmp11-006	OTTMUST00000158639.1	674	37aa	OTTMUSP00000082459	<p>Genes and/or transcript that contains an open reading frame (ORF).</p>Protein coding	-	-	3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete
Mmp11-004	OTTMUST00000078997.1	581	155aa	OTTMUSP00000042092	<p>Genes and/or transcript that contains an open reading frame (ORF).</p>Protein coding	-	F6QGW1	5' truncation in transcript evidence prevents annotation of the start of the CDS.CDS 5' incomplete
Mmp11-005	OTTMUST00000078998.1	335	3aa	OTTMUSP00000042093	Transcript is thought to undergo nonsense mediated decay, a process which detects nonsense mutations and prevents the expression of truncated or erroneous proteins. Nonsense mediated decay	-	-	5' truncation in transcript evidence prevents annotation of the start of the CDS.CDS 5' incomplete
Mmp11-003	OTTMUST00000078996.1	792	No protein	-	<p>Alternatively spliced transcript that is believed to contain intronic sequence relative to other coding transcripts in a given locus.</p>Retained intron	-	-

Summary

Statistics

Exons: 4 Transcript length: 674 bps Translation length: 37 residues

Class

Putative protein coding [Definition]

Author

This transcript was annotated by Havana

Version & date

Version 1, last modified on 22/09/2016 (Created on 22/09/2016)

Alternative symbols

RP23-333M15.5-006

Annotation Attributes

not organism-supported [Definitions]

Remarks

CDS end not found

mRNA end not found

Other assemblies

This transcript maps to 75,927,169-75,936,496 in GRCm38 (Ensembl) coordinates.

Jump to this stable ID in Ensembl

Alternative transcripts

Ensembl transcript having exact match with Havana:	ENSMUST00000219728

Curation Method

Manual annotation from Havana