Description
Rap guanine nucleotide exchange factor (GEF)
Location
Chromosome 15: 97,744,770-97,767,846 reverse strand.
About this transcript
This transcript has 28 exons and is annotated with 35 domains and features.
Gene
This transcript is a product of gene OTTMUSG00000032758 Show transcript tableHide transcript table
| Name | Transcript ID | bp | Protein | Translation ID | Biotype | CCDS | UniProt | Flags |
|---|---|---|---|---|---|---|---|---|
| Rapgef3-005 | OTTMUST00000081544.2 | 4005 | 926aa | OTTMUSP00000043645 | <p>Genes and/or transcript that contains an open reading frame (ORF).</p>Protein coding | CCDS49714 | - | |
| Rapgef3-001 | OTTMUST00000081539.3 | 3750 | 918aa | OTTMUSP00000043642 | <p>Genes and/or transcript that contains an open reading frame (ORF).</p>Protein coding | CCDS37187 | Q8VCC8 | |
| Rapgef3-003 | OTTMUST00000081542.2 | 3586 | 909aa | OTTMUSP00000043644 | <p>Genes and/or transcript that contains an open reading frame (ORF).</p>Protein coding | CCDS49713 | E9Q2E5 | |
| Rapgef3-007 | OTTMUST00000081547.2 | 3395 | 884aa | OTTMUSP00000043648 | <p>Genes and/or transcript that contains an open reading frame (ORF).</p>Protein coding | - | H3BK39 | |
| Rapgef3-002 | OTTMUST00000081541.2 | 1422 | 216aa | OTTMUSP00000061944 | <p>Genes and/or transcript that contains an open reading frame (ORF).</p>Protein coding | - | H3BKA8 | |
| Rapgef3-008 | OTTMUST00000081546.3 | 661 | 150aa | OTTMUSP00000043647 | <p>Genes and/or transcript that contains an open reading frame (ORF).</p>Protein coding | - | D3Z4E9 | 3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete |
| Rapgef3-006 | OTTMUST00000081545.2 | 392 | 40aa | OTTMUSP00000043646 | <p>Genes and/or transcript that contains an open reading frame (ORF).</p>Protein coding | - | D3Z514 | 3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete |
| Rapgef3-017 | OTTMUST00000110887.1 | 1561 | No protein | - | <p>Error in the sequence in a public database (for example UniProtKB, NCBI RefSeq). Annotation is by the <a rel="external" href="http://vega.sanger.ac.uk/info/about/gene_and_transcript_types.html">VEGA/Havana</a> project.</p>Artifact | - | - | |
| Rapgef3-018 | OTTMUST00000110924.1 | 2612 | 79aa | OTTMUSP00000061972 | Transcript is thought to undergo nonsense mediated decay, a process which detects nonsense mutations and prevents the expression of truncated or erroneous proteins. Nonsense mediated decay | - | H3BK02 | |
| Rapgef3-009 | OTTMUST00000081548.2 | 856 | 85aa | OTTMUSP00000043649 | Transcript is thought to undergo nonsense mediated decay, a process which detects nonsense mutations and prevents the expression of truncated or erroneous proteins. Nonsense mediated decay | - | D6RGA9 | |
| Rapgef3-013 | OTTMUST00000081582.2 | 391 | 71aa | OTTMUSP00000043666 | Transcript is thought to undergo nonsense mediated decay, a process which detects nonsense mutations and prevents the expression of truncated or erroneous proteins. Nonsense mediated decay | - | F7BXV7 | 5' truncation in transcript evidence prevents annotation of the start of the CDS.CDS 5' incomplete |
| Rapgef3-010 | OTTMUST00000081540.3 | 619 | No protein | - | <p>Transcripts that don't contain an open reading frame (ORF) and cannot be placed in one of the other categories.</p>Processed transcript | - | - | |
| Rapgef3-012 | OTTMUST00000081581.1 | 371 | No protein | - | <p>Transcripts that don't contain an open reading frame (ORF) and cannot be placed in one of the other categories.</p>Processed transcript | - | - | |
| Rapgef3-004 | OTTMUST00000081543.1 | 4204 | No protein | - | <p>Alternatively spliced transcript that is believed to contain intronic sequence relative to other coding transcripts in a given locus.</p>Retained intron | - | - | |
| Rapgef3-016 | OTTMUST00000081585.1 | 781 | No protein | - | <p>Alternatively spliced transcript that is believed to contain intronic sequence relative to other coding transcripts in a given locus.</p>Retained intron | - | - | |
| Rapgef3-014 | OTTMUST00000081583.2 | 729 | No protein | - | <p>Alternatively spliced transcript that is believed to contain intronic sequence relative to other coding transcripts in a given locus.</p>Retained intron | - | - | |
| Rapgef3-015 | OTTMUST00000081584.1 | 654 | No protein | - | <p>Alternatively spliced transcript that is believed to contain intronic sequence relative to other coding transcripts in a given locus.</p>Retained intron | - | - | |
| Rapgef3-011 | OTTMUST00000081580.1 | 456 | No protein | - | <p>Alternatively spliced transcript that is believed to contain intronic sequence relative to other coding transcripts in a given locus.</p>Retained intron | - | - |
