Transcript: Nubpl-004 OTTMUST00000082137.1

Description

nucleotide binding protein-like

Location

About this transcript

This transcript has 6 exons and is annotated with 6 domains and features.

Gene

Name	Transcript ID	bp	Protein	Translation ID	Biotype	CCDS	UniProt	Flags
Nubpl-001	OTTMUST00000082106.2	2987	319aa	OTTMUSP00000043994	<p>Genes and/or transcript that contains an open reading frame (ORF).</p>Protein coding	CCDS36442	Q9CWD8
Nubpl-004	OTTMUST00000082137.1	561	138aa	OTTMUSP00000044015	Transcript is thought to undergo nonsense mediated decay, a process which detects nonsense mutations and prevents the expression of truncated or erroneous proteins. Nonsense mediated decay	-	F7D3P0	5' truncation in transcript evidence prevents annotation of the start of the CDS.CDS 5' incomplete
Nubpl-005	OTTMUST00000082138.1	361	No protein	-	<p>Transcripts that don't contain an open reading frame (ORF) and cannot be placed in one of the other categories.</p>Processed transcript	-	-
Nubpl-002	OTTMUST00000082107.1	1308	No protein	-	<p>Alternatively spliced transcript that is believed to contain intronic sequence relative to other coding transcripts in a given locus.</p>Retained intron	-	-
Nubpl-003	OTTMUST00000082136.1	896	No protein	-	<p>Alternatively spliced transcript that is believed to contain intronic sequence relative to other coding transcripts in a given locus.</p>Retained intron	-	-

Summary

Statistics

Exons: 6 Transcript length: 561 bps Translation length: 138 residues

Class

nonsense mediated decay [Definition]

Author

This transcript was annotated by Havana

Version & date

Version 1, last modified on 10/03/2012 (Created on 03/06/2008)

Alternative symbols

RP23-388C15.1-004

Remarks

CDS start not found

mRNA start not found

Other assemblies

This transcript maps to 52,132,384-52,302,721 in GRCm38 (Ensembl) coordinates.

Jump to this stable ID in Ensembl

Alternative transcripts

Ensembl transcript having exact match with Havana:	ENSMUST00000159567

Curation Method

Manual annotation from Havana