Transcript: Rrp9-001 OTTMUST00000084574.2

Description

RRP9, small subunit (SSU) processome component, homolog (yeast)

Location

Chromosome 9: 106,477,269-106,485,424 forward strand.

About this transcript

This transcript has 15 exons and is annotated with 29 domains and features.

Gene

This transcript is a product of gene OTTMUSG00000033577 Show transcript tableHide transcript table

Name	Transcript ID	bp	Protein	Translation ID	Biotype	CCDS	UniProt	Flags
Rrp9-001	OTTMUST00000084574.2	1586	475aa	OTTMUSP00000045599	<p>Genes and/or transcript that contains an open reading frame (ORF).</p>Protein coding	CCDS23481	Q91WM3
Rrp9-007	OTTMUST00000126662.1	482	67aa	OTTMUSP00000068467	Transcript is thought to undergo nonsense mediated decay, a process which detects nonsense mutations and prevents the expression of truncated or erroneous proteins. Nonsense mediated decay	-	-	5' truncation in transcript evidence prevents annotation of the start of the CDS.CDS 5' incomplete
Rrp9-004	OTTMUST00000084577.1	449	No protein	-	<p>Transcripts that don't contain an open reading frame (ORF) and cannot be placed in one of the other categories.</p>Processed transcript	-	-
Rrp9-002	OTTMUST00000084575.1	1611	No protein	-	<p>Alternatively spliced transcript that is believed to contain intronic sequence relative to other coding transcripts in a given locus.</p>Retained intron	-	-
Rrp9-006	OTTMUST00000084579.1	860	No protein	-	<p>Alternatively spliced transcript that is believed to contain intronic sequence relative to other coding transcripts in a given locus.</p>Retained intron	-	-
Rrp9-008	OTTMUST00000154508.1	725	No protein	-	<p>Alternatively spliced transcript that is believed to contain intronic sequence relative to other coding transcripts in a given locus.</p>Retained intron	-	-
Rrp9-003	OTTMUST00000084576.1	424	No protein	-	<p>Alternatively spliced transcript that is believed to contain intronic sequence relative to other coding transcripts in a given locus.</p>Retained intron	-	-
Rrp9-005	OTTMUST00000084578.1	411	No protein	-	<p>Alternatively spliced transcript that is believed to contain intronic sequence relative to other coding transcripts in a given locus.</p>Retained intron	-	-

Summary

Statistics

Exons: 15 Transcript length: 1,586 bps Translation length: 475 residues

CCDS

This transcript is a member of the Mouse CCDS set: CCDS23481

Class

Known protein coding [Definition]

Author

This transcript was annotated by Havana

Version & date

Version 2, last modified on 11/04/2014 (Created on 22/09/2008)

Alternative symbols

RP24-74F2.1-001

Other assemblies

This transcript maps to 106,477,269-106,485,424 in GRCm38 (Ensembl) coordinates.

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Alternative transcripts

Ensembl transcript having exact match with Havana:	ENSMUST00000047721

Curation Method

Manual annotation from Havana

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Recent locations

Transcript: Rrp9-001 OTTMUST00000084574.2

Summary

Transcript-based displays