Transcript: Slc9b1-006 OTTMUST00000086670.3

Description

solute carrier family 9, subfamily B (NHA1, cation proton antiporter 1), member 1

Location

Chromosome 3: 135,348,029-135,371,979 forward strand.

About this transcript

This transcript has 4 exons and is annotated with 4 domains and features.

Gene

This transcript is a product of gene OTTMUSG00000034178 Show transcript tableHide transcript table

Name	Transcript ID	bp	Protein	Translation ID	Biotype	CCDS	UniProt	Flags
Slc9b1-001	OTTMUST00000086665.1	2248	565aa	OTTMUSP00000046929	<p>Genes and/or transcript that contains an open reading frame (ORF).</p>Protein coding	CCDS17855	G5E8I2
Slc9b1-006	OTTMUST00000086670.3	588	144aa	OTTMUSP00000046931	<p>Genes and/or transcript that contains an open reading frame (ORF).</p>Protein coding	-	-	3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete
Slc9b1-007	OTTMUST00000086671.2	783	88aa	OTTMUSP00000046932	Transcript is thought to undergo nonsense mediated decay, a process which detects nonsense mutations and prevents the expression of truncated or erroneous proteins. Nonsense mediated decay	-	F7CTY9	5' truncation in transcript evidence prevents annotation of the start of the CDS.CDS 5' incomplete
Slc9b1-004	OTTMUST00000086668.3	2072	No protein	-	<p>Transcripts that don't contain an open reading frame (ORF) and cannot be placed in one of the other categories.</p>Processed transcript	-	-
Slc9b1-008	OTTMUST00000086672.1	294	No protein	-	<p>Transcripts that don't contain an open reading frame (ORF) and cannot be placed in one of the other categories.</p>Processed transcript	-	-
Slc9b1-005	OTTMUST00000086669.1	1545	No protein	-	<p>Alternatively spliced transcript that is believed to contain intronic sequence relative to other coding transcripts in a given locus.</p>Retained intron	-	-
Slc9b1-003	OTTMUST00000086667.1	1407	No protein	-	<p>Alternatively spliced transcript that is believed to contain intronic sequence relative to other coding transcripts in a given locus.</p>Retained intron	-	-
Slc9b1-002	OTTMUST00000086666.1	1196	No protein	-	<p>Alternatively spliced transcript that is believed to contain intronic sequence relative to other coding transcripts in a given locus.</p>Retained intron	-	-
Slc9b1-009	OTTMUST00000086673.1	492	No protein	-	<p>Alternatively spliced transcript that is believed to contain intronic sequence relative to other coding transcripts in a given locus.</p>Retained intron	-	-

Summary

Statistics

Exons: 4 Transcript length: 588 bps Translation length: 144 residues

Class

Putative protein coding [Definition]

Author

This transcript was annotated by Havana

Version & date

Version 3, last modified on 10/07/2015 (Created on 24/02/2009)

Alternative symbols

AC156618.3-006

Remarks

CDS end not found

mRNA end not found

Other assemblies

This transcript maps to 135,348,029-135,371,979 in GRCm38 (Ensembl) coordinates.

Jump to this stable ID in Ensembl

Alternative transcripts

Ensembl transcript having exact match with Havana:	ENSMUST00000159658

Curation Method

Manual annotation from Havana

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Recent locations

Transcript: Slc9b1-006 OTTMUST00000086670.3

Summary

Transcript-based displays