Transcript: Cacna1i-001 OTTMUST00000087565.1

Description

calcium channel, voltage-dependent, alpha 1I subunit

Location

Chromosome 15: 80,287,238-80,398,279 forward strand.

About this transcript

This transcript has 37 exons and is annotated with 70 domains and features.

Gene

This transcript is a product of gene OTTMUSG00000034511 Show transcript tableHide transcript table

Name	Transcript ID	bp	Protein	Translation ID	Biotype	CCDS	UniProt	Flags
Cacna1i-001	OTTMUST00000087565.1	9781	2199aa	OTTMUSP00000047634	<p>Genes and/or transcript that contains an open reading frame (ORF).</p>Protein coding	CCDS49670	E9Q7P2
Cacna1i-003	OTTMUST00000087567.2	779	260aa	OTTMUSP00000047636	<p>Genes and/or transcript that contains an open reading frame (ORF).</p>Protein coding	-	F6V0N5	5' and 3' truncations in transcript evidence prevent annotation of the start and the end of the CDS.CDS 5' and 3' incomplete
Cacna1i-004	OTTMUST00000087568.2	394	132aa	OTTMUSP00000047637	<p>Genes and/or transcript that contains an open reading frame (ORF).</p>Protein coding	-	F6TAX9	5' and 3' truncations in transcript evidence prevent annotation of the start and the end of the CDS.CDS 5' and 3' incomplete
Cacna1i-005	OTTMUST00000087569.2	313	105aa	OTTMUSP00000047638	<p>Genes and/or transcript that contains an open reading frame (ORF).</p>Protein coding	-	F7BQ85	5' and 3' truncations in transcript evidence prevent annotation of the start and the end of the CDS.CDS 5' and 3' incomplete
Cacna1i-002	OTTMUST00000087566.1	6913	1835aa	OTTMUSP00000047635	Transcript is thought to undergo nonsense mediated decay, a process which detects nonsense mutations and prevents the expression of truncated or erroneous proteins. Nonsense mediated decay	-	E0CXK2
Cacna1i-006	OTTMUST00000087570.1	273	85aa	OTTMUSP00000047639	Transcript is thought to undergo nonsense mediated decay, a process which detects nonsense mutations and prevents the expression of truncated or erroneous proteins. Nonsense mediated decay	-	F7BCE6	5' truncation in transcript evidence prevents annotation of the start of the CDS.CDS 5' incomplete

Summary

Statistics

Exons: 37 Transcript length: 9,781 bps Translation length: 2,199 residues

CCDS

This transcript is a member of the Mouse CCDS set: CCDS49670

Class

Known protein coding [Definition]

Author

This transcript was annotated by Havana

Version & date

Version 1, last modified on 17/07/2013 (Created on 28/04/2009)

Alternative symbols

RP23-349D10.1-001

Remarks

NP_001037773

Other assemblies

This transcript maps to 80,287,238-80,398,279 in GRCm38 (Ensembl) coordinates.

Jump to this stable ID in Ensembl

Alternative transcripts

Ensembl transcript having exact match with Havana:	ENSMUST00000160424

Curation Method

Manual annotation from Havana

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Recent locations

Transcript: Cacna1i-001 OTTMUST00000087565.1

Summary

Transcript-based displays