Transcript: Bdp1-001 OTTMUST00000089552.1

Description

B double prime 1, subunit of RNA polymerase III transcription initiation factor IIIB

Location

Chromosome 13: 100,017,994-100,104,070 reverse strand.

About this transcript

This transcript has 39 exons and is annotated with 25 domains and features.

Gene

This transcript is a product of gene OTTMUSG00000035163 Show transcript tableHide transcript table

Name	Transcript ID	bp	Protein	Translation ID	Biotype	CCDS	UniProt	Flags
Bdp1-001	OTTMUST00000089552.1	9921	2467aa	OTTMUSP00000048957	<p>Genes and/or transcript that contains an open reading frame (ORF).</p>Protein coding	CCDS49343	Q571C7
Bdp1-003	OTTMUST00000089554.1	7567	2471aa	OTTMUSP00000048959	<p>Genes and/or transcript that contains an open reading frame (ORF).</p>Protein coding	-	-
Bdp1-002	OTTMUST00000089553.1	5352	325aa	OTTMUSP00000048958	Transcript is thought to undergo nonsense mediated decay, a process which detects nonsense mutations and prevents the expression of truncated or erroneous proteins. Nonsense mediated decay	-	F8VQC2	5' truncation in transcript evidence prevents annotation of the start of the CDS.CDS 5' incomplete
Bdp1-004	OTTMUST00000089555.1	631	128aa	OTTMUSP00000048960	Transcript is thought to undergo nonsense mediated decay, a process which detects nonsense mutations and prevents the expression of truncated or erroneous proteins. Nonsense mediated decay	-	E9PYY8
Bdp1-005	OTTMUST00000089556.1	628	193aa	OTTMUSP00000048961	Transcript is thought to undergo nonsense mediated decay, a process which detects nonsense mutations and prevents the expression of truncated or erroneous proteins. Nonsense mediated decay	-	F6Y5R2	5' truncation in transcript evidence prevents annotation of the start of the CDS.CDS 5' incomplete
Bdp1-007	OTTMUST00000089558.1	809	No protein	-	<p>Alternatively spliced transcript that is believed to contain intronic sequence relative to other coding transcripts in a given locus.</p>Retained intron	-	-
Bdp1-006	OTTMUST00000089557.1	636	No protein	-	<p>Alternatively spliced transcript that is believed to contain intronic sequence relative to other coding transcripts in a given locus.</p>Retained intron	-	-

Summary

Statistics

Exons: 39 Transcript length: 9,921 bps Translation length: 2,467 residues

CCDS

This transcript is a member of the Mouse CCDS set: CCDS49343

Class

Known protein coding [Definition]

Author

This transcript was annotated by Havana

Version & date

Version 1, last modified on 25/07/2012 (Created on 26/10/2009)

Alternative symbols

RP24-68J22.1-001

Other assemblies

This transcript maps to 100,017,994-100,104,070 in GRCm38 (Ensembl) coordinates.

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Alternative transcripts

Ensembl transcript having exact match with Havana:	ENSMUST00000038104

Curation Method

Manual annotation from Havana

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Recent locations

Transcript: Bdp1-001 OTTMUST00000089552.1

Summary

Transcript-based displays