Transcript: Cenpf-003 OTTMUST00000089579.1

Description

centromere protein F

Location

About this transcript

This transcript has 4 exons and is annotated with 4 domains and features.

Gene

Name	Transcript ID	bp	Protein	Translation ID	Biotype	CCDS	UniProt	Flags
Cenpf-001	OTTMUST00000089577.2	11130	2997aa	OTTMUSP00000048974	<p>Genes and/or transcript that contains an open reading frame (ORF).</p>Protein coding	CCDS35820	E9Q3P4
Cenpf-002	OTTMUST00000089578.2	3001	952aa	OTTMUSP00000048975	<p>Genes and/or transcript that contains an open reading frame (ORF).</p>Protein coding	-	E9PY14	3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete
Cenpf-004	OTTMUST00000089580.2	358	119aa	OTTMUSP00000048977	<p>Genes and/or transcript that contains an open reading frame (ORF).</p>Protein coding	-	F6V6F0	5' and 3' truncations in transcript evidence prevent annotation of the start and the end of the CDS.CDS 5' and 3' incomplete
Cenpf-003	OTTMUST00000089579.1	609	88aa	OTTMUSP00000048976	Transcript is thought to undergo nonsense mediated decay, a process which detects nonsense mutations and prevents the expression of truncated or erroneous proteins. Nonsense mediated decay	-	E9Q776
Cenpf-005	OTTMUST00000129598.1	3389	No protein	-	<p>Alternatively spliced transcript that is believed to contain intronic sequence relative to other coding transcripts in a given locus.</p>Retained intron	-	-
Cenpf-006	OTTMUST00000129599.1	1027	No protein	-	<p>Alternatively spliced transcript that is believed to contain intronic sequence relative to other coding transcripts in a given locus.</p>Retained intron	-	-

Summary

Statistics

Exons: 4 Transcript length: 609 bps Translation length: 88 residues

Class

nonsense mediated decay [Definition]

Author

This transcript was annotated by Havana

Version & date

Version 1, last modified on 02/10/2013 (Created on 28/10/2009)

Alternative symbols

RP24-511M8.1-003

Other assemblies

This transcript maps to 189,683,826-189,688,035 in GRCm38 (Ensembl) coordinates.

Jump to this stable ID in Ensembl

Alternative transcripts

Ensembl transcript having exact match with Havana:	ENSMUST00000165663

Curation Method

Manual annotation from Havana