Transcript: Tonsl-008 OTTMUST00000089900.1

Description

nuclear factor of kappa light polypeptide gene enhancer in B-cells inhibitor-like 2

Location

Chromosome 15: 76,626,002-76,629,299 reverse strand.

About this transcript

This transcript has 4 exons and is annotated with 5 domains and features.

Gene

This transcript is a product of gene OTTMUSG00000035250 Show transcript tableHide transcript table

Name	Transcript ID	bp	Protein	Translation ID	Biotype	CCDS	UniProt	Flags
Tonsl-001	OTTMUST00000089893.1	4235	1363aa	OTTMUSP00000049174	<p>Genes and/or transcript that contains an open reading frame (ORF).</p>Protein coding	CCDS27580	G3UW83
Tonsl-008	OTTMUST00000089900.1	743	86aa	OTTMUSP00000049178	<p>Genes and/or transcript that contains an open reading frame (ORF).</p>Protein coding	-	-	5' truncation in transcript evidence prevents annotation of the start of the CDS.CDS 5' incomplete
Tonsl-003	OTTMUST00000089895.2	471	64aa	OTTMUSP00000049176	<p>Genes and/or transcript that contains an open reading frame (ORF).</p>Protein coding	-	-	3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete
Tonsl-002	OTTMUST00000089894.1	2932	417aa	OTTMUSP00000049175	Transcript is thought to undergo nonsense mediated decay, a process which detects nonsense mutations and prevents the expression of truncated or erroneous proteins. Nonsense mediated decay	-	-
Tonsl-006	OTTMUST00000089898.1	713	83aa	OTTMUSP00000049177	Transcript is thought to undergo nonsense mediated decay, a process which detects nonsense mutations and prevents the expression of truncated or erroneous proteins. Nonsense mediated decay	-	-	5' truncation in transcript evidence prevents annotation of the start of the CDS.CDS 5' incomplete
Tonsl-007	OTTMUST00000089899.1	502	No protein	-	<p>Alternatively spliced transcript that is believed to contain intronic sequence relative to other coding transcripts in a given locus.</p>Retained intron	-	-
Tonsl-005	OTTMUST00000089897.1	491	No protein	-	<p>Alternatively spliced transcript that is believed to contain intronic sequence relative to other coding transcripts in a given locus.</p>Retained intron	-	-
Tonsl-004	OTTMUST00000089896.1	420	No protein	-	<p>Alternatively spliced transcript that is believed to contain intronic sequence relative to other coding transcripts in a given locus.</p>Retained intron	-	-

Summary

Statistics

Exons: 4 Transcript length: 743 bps Translation length: 86 residues

Class

Putative protein coding [Definition]

Author

This transcript was annotated by Havana

Version & date

Version 1, last modified on 10/03/2012 (Created on 19/11/2009)

Alternative symbols

RP23-415D19.3-008

Remarks

CDS start not found

mRNA start not found

Other assemblies

This transcript maps to 76,626,002-76,629,299 in GRCm38 (Ensembl) coordinates.

Jump to this stable ID in Ensembl

Alternative transcripts

Ensembl transcript having exact match with Havana:	ENSMUST00000165163

Curation Method

Manual annotation from Havana

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Recent locations

Transcript: Tonsl-008 OTTMUST00000089900.1

Summary

Transcript-based displays