Transcript: Iars-001 OTTMUST00000090052.9

Description

isoleucine-tRNA synthetase

Location

Chromosome 13: 49,682,100-49,734,267 forward strand.

About this transcript

This transcript has 34 exons and is annotated with 25 domains and features.

Gene

This transcript is a product of gene OTTMUSG00000035300 Show transcript tableHide transcript table

Name	Transcript ID	bp	Protein	Translation ID	Biotype	CCDS	UniProt	Flags
Iars-001	OTTMUST00000090052.9	4426	1262aa	OTTMUSP00000049310	<p>Genes and/or transcript that contains an open reading frame (ORF).</p>Protein coding	CCDS36659	Q8BU30
Iars-002	OTTMUST00000090062.18	401	92aa	OTTMUSP00000049325	<p>Genes and/or transcript that contains an open reading frame (ORF).</p>Protein coding	-	E9Q866	3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete
Iars-003	OTTMUST00000090072.1	504	96aa	OTTMUSP00000049336	Transcript is thought to undergo nonsense mediated decay, a process which detects nonsense mutations and prevents the expression of truncated or erroneous proteins. Nonsense mediated decay	-	F6Q6R1	5' truncation in transcript evidence prevents annotation of the start of the CDS.CDS 5' incomplete
Iars-005	OTTMUST00000090074.1	889	No protein	-	<p>Alternatively spliced transcript that is believed to contain intronic sequence relative to other coding transcripts in a given locus.</p>Retained intron	-	-
Iars-004	OTTMUST00000090073.3	787	No protein	-	<p>Alternatively spliced transcript that is believed to contain intronic sequence relative to other coding transcripts in a given locus.</p>Retained intron	-	-
Iars-007	OTTMUST00000090189.2	742	No protein	-	<p>Alternatively spliced transcript that is believed to contain intronic sequence relative to other coding transcripts in a given locus.</p>Retained intron	-	-
Iars-006	OTTMUST00000090075.3	356	No protein	-	<p>Alternatively spliced transcript that is believed to contain intronic sequence relative to other coding transcripts in a given locus.</p>Retained intron	-	-

Summary

Statistics

Exons: 34 Transcript length: 4,426 bps Translation length: 1,262 residues

CCDS

This transcript is a member of the Mouse CCDS set: CCDS36659

Class

Known protein coding [Definition]

Author

This transcript was annotated by Havana

Version & date

Version 9, last modified on 23/10/2012 (Created on 17/12/2009)

Alternative symbols

RP23-443A7.1-001

Remarks

5730453P06Rik

E430001P04Rik

NP_742012

Other assemblies

This transcript maps to 49,682,100-49,734,267 in GRCm38 (Ensembl) coordinates.

Jump to this stable ID in Ensembl

Alternative transcripts

Ensembl transcript having exact match with Havana:	ENSMUST00000165316

Curation Method

Manual annotation from Havana

Select a species

Recent locations

Transcript: Iars-001 OTTMUST00000090052.9

Summary

Transcript-based displays