Transcript: Sema3c-003 OTTMUST00000090135.14

Description

sema domain, immunoglobulin domain (Ig), short basic domain, secreted, (semaphorin) 3C

Location

About this transcript

This transcript has 8 exons and is annotated with 1 domain and feature.

Gene

Name	Transcript ID	bp	Protein	Translation ID	Biotype	CCDS	UniProt	Flags
Sema3c-001	OTTMUST00000090077.3	5491	751aa	OTTMUSP00000049340	<p>Genes and/or transcript that contains an open reading frame (ORF).</p>Protein coding	CCDS19099	Q62181
Sema3c-005	OTTMUST00000090155.4	785	226aa	OTTMUSP00000049402	<p>Genes and/or transcript that contains an open reading frame (ORF).</p>Protein coding	-	E9Q0Z0	3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete
Sema3c-003	OTTMUST00000090135.14	1142	42aa	OTTMUSP00000049385	Transcript is thought to undergo nonsense mediated decay, a process which detects nonsense mutations and prevents the expression of truncated or erroneous proteins. Nonsense mediated decay	-	E9PXL2
Sema3c-004	OTTMUST00000090136.3	4075	No protein	-	<p>Alternatively spliced transcript that is believed to contain intronic sequence relative to other coding transcripts in a given locus.</p>Retained intron	-	-
Sema3c-002	OTTMUST00000090134.1	1549	No protein	-	<p>Alternatively spliced transcript that is believed to contain intronic sequence relative to other coding transcripts in a given locus.</p>Retained intron	-	-

Summary

Statistics

Exons: 8 Transcript length: 1,142 bps Translation length: 42 residues

Class

nonsense mediated decay [Definition]

Author

This transcript was annotated by Havana

Version & date

Version 14, last modified on 27/08/2014 (Created on 06/01/2010)

Alternative symbols

RP23-20H6.1-003

Annotation Attributes

not organism-supported [Definitions]

Other assemblies

This transcript maps to 17,574,649-17,682,083 in GRCm38 (Ensembl) coordinates.

Jump to this stable ID in Ensembl

Alternative transcripts

Ensembl transcript having exact match with Havana:	ENSMUST00000170181

Curation Method

Manual annotation from Havana