Transcript: Rab40c-003 OTTMUST00000091962.1

Description

Rab40c, member RAS oncogene family

Location

About this transcript

This transcript has 8 exons and is annotated with 3 domains and features.

Gene

Name	Transcript ID	bp	Protein	Translation ID	Biotype	CCDS	UniProt	Flags
Rab40c-001	OTTMUST00000091963.1	2506	281aa	OTTMUSP00000050723	<p>Genes and/or transcript that contains an open reading frame (ORF).</p>Protein coding	CCDS28537	Q8VHQ4
Rab40c-005	OTTMUST00000091967.2	954	278aa	OTTMUSP00000050726	<p>Genes and/or transcript that contains an open reading frame (ORF).</p>Protein coding	-	E9PXR4	3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete
Rab40c-004	OTTMUST00000091966.2	789	262aa	OTTMUSP00000050725	<p>Genes and/or transcript that contains an open reading frame (ORF).</p>Protein coding	-	E9Q016
Rab40c-006	OTTMUST00000091968.2	451	111aa	OTTMUSP00000050727	<p>Genes and/or transcript that contains an open reading frame (ORF).</p>Protein coding	-	E9Q7Y6	3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete
Rab40c-003	OTTMUST00000091962.1	2900	56aa	OTTMUSP00000050722	Transcript is thought to undergo nonsense mediated decay, a process which detects nonsense mutations and prevents the expression of truncated or erroneous proteins. Nonsense mediated decay	-	-
Rab40c-002	OTTMUST00000091965.1	2238	No protein	-	<p>Transcripts that don't contain an open reading frame (ORF) and cannot be placed in one of the other categories.</p>Processed transcript	-	-
Rab40c-007	OTTMUST00000091964.2	373	No protein	-	<p>Transcripts that don't contain an open reading frame (ORF) and cannot be placed in one of the other categories.</p>Processed transcript	-	-

Summary

Statistics

Exons: 8 Transcript length: 2,900 bps Translation length: 56 residues

Class

nonsense mediated decay [Definition]

Author

This transcript was annotated by Havana

Version & date

Version 1, last modified on 10/03/2012 (Created on 28/04/2010)

Alternative symbols

RP23-356J2.9-003

Other assemblies

This transcript maps to 25,882,114-25,919,556 in GRCm38 (Ensembl) coordinates.

Jump to this stable ID in Ensembl

Alternative transcripts

Ensembl transcript having exact match with Havana:	ENSMUST00000166146

Curation Method

Manual annotation from Havana