Transcript: Lrrcc1-008 OTTMUST00000092090.1

Description

leucine rich repeat and coiled-coil domain containing 1

Location

Chromosome 3: 14,548,193-14,554,472 forward strand.

About this transcript

This transcript has 4 exons and is annotated with 2 domains and features.

Gene

This transcript is a product of gene OTTMUSG00000035907 Show transcript tableHide transcript table

Name	Transcript ID	bp	Protein	Translation ID	Biotype	CCDS	UniProt	Flags
Lrrcc1-001	OTTMUST00000092085.1	5638	1026aa	OTTMUSP00000050812	<p>Genes and/or transcript that contains an open reading frame (ORF).</p>Protein coding	CCDS50866	G5E8Y2
Lrrcc1-002	OTTMUST00000092086.1	3391	1010aa	OTTMUSP00000050813	<p>Genes and/or transcript that contains an open reading frame (ORF).</p>Protein coding	CCDS50865	-
Lrrcc1-004	OTTMUST00000092084.1	3359	993aa	OTTMUSP00000050811	<p>Genes and/or transcript that contains an open reading frame (ORF).</p>Protein coding	CCDS38390	-
Lrrcc1-003	OTTMUST00000092089.1	3700	581aa	OTTMUSP00000050816	<p>Genes and/or transcript that contains an open reading frame (ORF).</p>Protein coding	-	-	5' truncation in transcript evidence prevents annotation of the start of the CDS.CDS 5' incomplete
Lrrcc1-006	OTTMUST00000092087.2	2364	716aa	OTTMUSP00000050814	<p>Genes and/or transcript that contains an open reading frame (ORF).</p>Protein coding	-	-	3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete
Lrrcc1-007	OTTMUST00000092091.2	691	231aa	OTTMUSP00000050818	<p>Genes and/or transcript that contains an open reading frame (ORF).</p>Protein coding	-	-	5' and 3' truncations in transcript evidence prevent annotation of the start and the end of the CDS.CDS 5' and 3' incomplete
Lrrcc1-005	OTTMUST00000092088.1	1518	178aa	OTTMUSP00000050815	Transcript is thought to undergo nonsense mediated decay, a process which detects nonsense mutations and prevents the expression of truncated or erroneous proteins. Nonsense mediated decay	-	-
Lrrcc1-008	OTTMUST00000092090.1	794	100aa	OTTMUSP00000050817	Transcript is thought to undergo nonsense mediated decay, a process which detects nonsense mutations and prevents the expression of truncated or erroneous proteins. Nonsense mediated decay	-	-	5' truncation in transcript evidence prevents annotation of the start of the CDS.CDS 5' incomplete

Summary

Statistics

Exons: 4 Transcript length: 794 bps Translation length: 100 residues

Class

nonsense mediated decay [Definition]

Author

This transcript was annotated by Havana

Version & date

Version 1, last modified on 10/03/2012 (Created on 03/05/2010)

Alternative symbols

RP24-251F16.1-008

Remarks

CDS start not found

mRNA start not found

Other assemblies

This transcript maps to 14,548,193-14,554,472 in GRCm38 (Ensembl) coordinates.

Jump to this stable ID in Ensembl

Alternative transcripts

Ensembl transcript having exact match with Havana:	ENSMUST00000171620

Curation Method

Manual annotation from Havana

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Recent locations

Transcript: Lrrcc1-008 OTTMUST00000092090.1

Summary

Transcript-based displays