Transcript: Hip1r-001 OTTMUST00000092103.3

Description

huntingtin interacting protein 1 related

Location

Chromosome 5: 123,973,628-124,005,558 forward strand.

About this transcript

This transcript has 32 exons and is annotated with 24 domains and features.

Gene

This transcript is a product of gene OTTMUSG00000035912 Show transcript tableHide transcript table

Name	Transcript ID	bp	Protein	Translation ID	Biotype	CCDS	UniProt	Flags
Hip1r-001	OTTMUST00000092103.3	6735	1068aa	OTTMUSP00000050828	<p>Genes and/or transcript that contains an open reading frame (ORF).</p>Protein coding	CCDS39276	Q9JKY5
Hip1r-002	OTTMUST00000092104.2	357	117aa	OTTMUSP00000050829	<p>Genes and/or transcript that contains an open reading frame (ORF).</p>Protein coding	-	E9Q3C5	3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete
Hip1r-003	OTTMUST00000092105.1	817	141aa	OTTMUSP00000050830	Transcript is thought to undergo nonsense mediated decay, a process which detects nonsense mutations and prevents the expression of truncated or erroneous proteins. Nonsense mediated decay	-	F7DCR9	5' truncation in transcript evidence prevents annotation of the start of the CDS.CDS 5' incomplete
Hip1r-007	OTTMUST00000135754.1	747	165aa	OTTMUSP00000071781	Transcript is thought to undergo nonsense mediated decay, a process which detects nonsense mutations and prevents the expression of truncated or erroneous proteins. Nonsense mediated decay	-	A0A0G2JFU3	5' truncation in transcript evidence prevents annotation of the start of the CDS.CDS 5' incomplete
Hip1r-006	OTTMUST00000092108.1	884	No protein	-	<p>Alternatively spliced transcript that is believed to contain intronic sequence relative to other coding transcripts in a given locus.</p>Retained intron	-	-
Hip1r-005	OTTMUST00000092107.1	835	No protein	-	<p>Alternatively spliced transcript that is believed to contain intronic sequence relative to other coding transcripts in a given locus.</p>Retained intron	-	-
Hip1r-004	OTTMUST00000092106.1	598	No protein	-	<p>Alternatively spliced transcript that is believed to contain intronic sequence relative to other coding transcripts in a given locus.</p>Retained intron	-	-

Summary

Statistics

Exons: 32 Transcript length: 6,735 bps Translation length: 1,068 residues

CCDS

This transcript is a member of the Mouse CCDS set: CCDS39276

Class

Known protein coding [Definition]

Author

This transcript was annotated by Havana

Version & date

Version 3, last modified on 29/10/2014 (Created on 03/05/2010)

Alternative symbols

RP24-492O4.3-001

Annotation Attributes

3' standard supported extension [Definitions]

Remarks

A730047B15Rik

NP_659507

Other assemblies

This transcript maps to 123,973,628-124,005,558 in GRCm38 (Ensembl) coordinates.

Jump to this stable ID in Ensembl

Alternative transcripts

Ensembl transcript having exact match with Havana:	ENSMUST00000000939

Curation Method

Manual annotation from Havana

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Recent locations

Transcript: Hip1r-001 OTTMUST00000092103.3

Summary

Transcript-based displays