Transcript: Nob1-001 OTTMUST00000092320.1

Description

NIN1/RPN12 binding protein 1 homolog (S. cerevisiae)

Location

Chromosome 8: 107,412,489-107,425,049 reverse strand.

About this transcript

This transcript has 9 exons and is annotated with 8 domains and features.

Gene

This transcript is a product of gene OTTMUSG00000035977 Show transcript tableHide transcript table

Name	Transcript ID	bp	Protein	Translation ID	Biotype	CCDS	UniProt	Flags
Nob1-001	OTTMUST00000092320.1	1658	403aa	OTTMUSP00000050998	<p>Genes and/or transcript that contains an open reading frame (ORF).</p>Protein coding	CCDS22649	Q8BW10
Nob1-002	OTTMUST00000092318.1	1255	159aa	OTTMUSP00000050996	Transcript is thought to undergo nonsense mediated decay, a process which detects nonsense mutations and prevents the expression of truncated or erroneous proteins. Nonsense mediated decay	-	E9PW56
Nob1-005	OTTMUST00000092322.2	476	62aa	OTTMUSP00000050999	Transcript is thought to undergo nonsense mediated decay, a process which detects nonsense mutations and prevents the expression of truncated or erroneous proteins. Nonsense mediated decay	-	F6YBB8	5' truncation in transcript evidence prevents annotation of the start of the CDS.CDS 5' incomplete
Nob1-007	OTTMUST00000092323.1	783	No protein	-	<p>Transcripts that don't contain an open reading frame (ORF) and cannot be placed in one of the other categories.</p>Processed transcript	-	-
Nob1-004	OTTMUST00000092317.1	2137	No protein	-	<p>Alternatively spliced transcript that is believed to contain intronic sequence relative to other coding transcripts in a given locus.</p>Retained intron	-	-
Nob1-003	OTTMUST00000092321.1	1427	No protein	-	<p>Alternatively spliced transcript that is believed to contain intronic sequence relative to other coding transcripts in a given locus.</p>Retained intron	-	-
Nob1-006	OTTMUST00000092319.2	863	No protein	-	<p>Alternatively spliced transcript that is believed to contain intronic sequence relative to other coding transcripts in a given locus.</p>Retained intron	-	-
Nob1-008	OTTMUST00000092324.1	426	No protein	-	<p>Alternatively spliced transcript that is believed to contain intronic sequence relative to other coding transcripts in a given locus.</p>Retained intron	-	-

Summary

Statistics

Exons: 9 Transcript length: 1,658 bps Translation length: 403 residues

CCDS

This transcript is a member of the Mouse CCDS set: CCDS22649

Class

Known protein coding [Definition]

Author

This transcript was annotated by Havana

Version & date

Version 1, last modified on 10/03/2012 (Created on 12/05/2010)

Alternative symbols

RP23-187J8.1-001

Remarks

1700021I09Rik

C330008P20Rik

NP_080553

Y0G0137B21Rik

Other assemblies

This transcript maps to 107,412,489-107,425,049 in GRCm38 (Ensembl) coordinates.

Jump to this stable ID in Ensembl

Alternative transcripts

Ensembl transcript having exact match with Havana:	ENSMUST00000003946

Curation Method

Manual annotation from Havana

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Recent locations

Transcript: Nob1-001 OTTMUST00000092320.1

Summary

Transcript-based displays