Transcript: Baz1a-004 OTTMUST00000096913.1

Description

bromodomain adjacent to zinc finger domain 1A

Location

Chromosome 12: 54,940,359-54,944,052 reverse strand.

About this transcript

This transcript has 3 exons and is annotated with 2 domains and features.

Gene

This transcript is a product of gene OTTMUSG00000037585 Show transcript tableHide transcript table

Name	Transcript ID	bp	Protein	Translation ID	Biotype	CCDS	UniProt	Flags
Baz1a-001	OTTMUST00000096910.1	5788	1552aa	OTTMUSP00000054217	<p>Genes and/or transcript that contains an open reading frame (ORF).</p>Protein coding	CCDS56838	G3UWZ0
Baz1a-003	OTTMUST00000096914.2	589	172aa	OTTMUSP00000054220	<p>Genes and/or transcript that contains an open reading frame (ORF).</p>Protein coding	-	-	3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete
Baz1a-006	OTTMUST00000096915.2	418	86aa	OTTMUSP00000054221	<p>Genes and/or transcript that contains an open reading frame (ORF).</p>Protein coding	-	-	3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete
Baz1a-002	OTTMUST00000096916.2	411	81aa	OTTMUSP00000054222	<p>Genes and/or transcript that contains an open reading frame (ORF).</p>Protein coding	-	-	3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete
Baz1a-004	OTTMUST00000096913.1	592	91aa	OTTMUSP00000054219	Transcript is thought to undergo nonsense mediated decay, a process which detects nonsense mutations and prevents the expression of truncated or erroneous proteins. Nonsense mediated decay	-	-	5' truncation in transcript evidence prevents annotation of the start of the CDS.CDS 5' incomplete
Baz1a-005	OTTMUST00000096912.1	557	79aa	OTTMUSP00000054218	Transcript is thought to undergo nonsense mediated decay, a process which detects nonsense mutations and prevents the expression of truncated or erroneous proteins. Nonsense mediated decay	-	-	5' truncation in transcript evidence prevents annotation of the start of the CDS.CDS 5' incomplete
Baz1a-007	OTTMUST00000096911.1	526	No protein	-	<p>Alternatively spliced transcript that is believed to contain intronic sequence relative to other coding transcripts in a given locus.</p>Retained intron	-	-

Summary

Statistics

Exons: 3 Transcript length: 592 bps Translation length: 91 residues

Class

nonsense mediated decay [Definition]

Author

This transcript was annotated by Havana

Version & date

Version 1, last modified on 10/03/2012 (Created on 10/03/2011)

Alternative symbols

RP24-380F18.1-004

Remarks

CDS start not found

mRNA start not found

Other assemblies

This transcript maps to 54,940,359-54,944,052 in GRCm38 (Ensembl) coordinates.

Jump to this stable ID in Ensembl

Alternative transcripts

Ensembl transcript having exact match with Havana:	ENSMUST00000173176

Curation Method

Manual annotation from Havana

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Recent locations

Transcript: Baz1a-004 OTTMUST00000096913.1

Summary

Transcript-based displays