Transcript: Hmbox1-005 OTTMUST00000103940.2

Description

homeobox containing 1

Location

Chromosome 14: 64,823,169-64,903,266 reverse strand.

About this transcript

This transcript has 10 exons and is annotated with 14 domains and features.

Gene

This transcript is a product of gene OTTMUSG00000040027 Show transcript tableHide transcript table

Name	Transcript ID	bp	Protein	Translation ID	Biotype	CCDS	UniProt	Flags
Hmbox1-006	OTTMUST00000103935.2	3396	404aa	OTTMUSP00000058115	<p>Genes and/or transcript that contains an open reading frame (ORF).</p>Protein coding	-	-
Hmbox1-001	OTTMUST00000103938.2	2958	420aa	OTTMUSP00000058117	<p>Genes and/or transcript that contains an open reading frame (ORF).</p>Protein coding	-	H3BKM3
Hmbox1-004	OTTMUST00000103941.1	1771	405aa	OTTMUSP00000058120	<p>Genes and/or transcript that contains an open reading frame (ORF).</p>Protein coding	-	H3BK67
Hmbox1-005	OTTMUST00000103940.2	1729	445aa	OTTMUSP00000058119	<p>Genes and/or transcript that contains an open reading frame (ORF).</p>Protein coding	-	H3BKF8	5' truncation in transcript evidence prevents annotation of the start of the CDS.CDS 5' incomplete
Hmbox1-002	OTTMUST00000103943.2	1715	416aa	OTTMUSP00000058122	<p>Genes and/or transcript that contains an open reading frame (ORF).</p>Protein coding	-	H3BL55
Hmbox1-008	OTTMUST00000103939.2	1586	408aa	OTTMUSP00000058118	<p>Genes and/or transcript that contains an open reading frame (ORF).</p>Protein coding	-	H3BK13
Hmbox1-007	OTTMUST00000103942.2	1422	364aa	OTTMUSP00000058121	<p>Genes and/or transcript that contains an open reading frame (ORF).</p>Protein coding	-	H3BJ31	3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete
Hmbox1-003	OTTMUST00000103936.1	614	No protein	-	<p>Transcripts that don't contain an open reading frame (ORF) and cannot be placed in one of the other categories.</p>Processed transcript	-	-
Hmbox1-009	OTTMUST00000103944.1	4740	No protein	-	<p>Alternatively spliced transcript that is believed to contain intronic sequence relative to other coding transcripts in a given locus.</p>Retained intron	-	-

Summary

Statistics

Exons: 10 Transcript length: 1,729 bps Translation length: 445 residues

Class

Novel protein coding [Definition]

Author

This transcript was annotated by Havana

Version & date

Version 2, last modified on 05/12/2013 (Created on 10/06/2011)

Alternative symbols

RP23-477C13.1-005

Annotation Attributes

not organism-supported [Definitions]

Remarks

NAGNAG splice site

CDS start not found

mRNA start not found

Other assemblies

This transcript maps to 64,823,169-64,903,266 in GRCm38 (Ensembl) coordinates.

Jump to this stable ID in Ensembl

Alternative transcripts

Ensembl transcript having exact match with Havana:	ENSMUST00000177326

Curation Method

Manual annotation from Havana

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Recent locations

Transcript: Hmbox1-005 OTTMUST00000103940.2

Summary

Transcript-based displays