Transcript: Taf6l-004 OTTMUST00000110960.1

Description

TAF6-like RNA polymerase II, p300/CBP-associated factor (PCAF)-associated factor

Location

Chromosome 19: 8,774,492-8,786,257 reverse strand.

About this transcript

This transcript has 12 exons and is annotated with 9 domains and features.

Gene

This transcript is a product of gene OTTMUSG00000042231 Show transcript tableHide transcript table

Name	Transcript ID	bp	Protein	Translation ID	Biotype	CCDS	UniProt
Taf6l-002	OTTMUST00000110962.1	2224	598aa	OTTMUSP00000061998	<p>Genes and/or transcript that contains an open reading frame (ORF).</p>Protein coding	CCDS57134	H3BJR2
Taf6l-001	OTTMUST00000110957.1	2203	623aa	OTTMUSP00000061995	<p>Genes and/or transcript that contains an open reading frame (ORF).</p>Protein coding	CCDS29546	H3BK01
Taf6l-004	OTTMUST00000110960.1	2167	623aa	OTTMUSP00000061996	<p>Genes and/or transcript that contains an open reading frame (ORF).</p>Protein coding	CCDS29546	H3BK01
Taf6l-005	OTTMUST00000110961.1	2006	616aa	OTTMUSP00000061997	<p>Genes and/or transcript that contains an open reading frame (ORF).</p>Protein coding	-	Q8R2K4
Taf6l-007	OTTMUST00000110958.1	1140	No protein	-	<p>Error in the sequence in a public database (for example UniProtKB, NCBI RefSeq). Annotation is by the <a rel="external" href="http://vega.sanger.ac.uk/info/about/gene_and_transcript_types.html">VEGA/Havana</a> project.</p>Artifact	-	-
Taf6l-010	OTTMUST00000110965.1	299	No protein	-	<p>Transcripts that don't contain an open reading frame (ORF) and cannot be placed in one of the other categories.</p>Processed transcript	-	-
Taf6l-006	OTTMUST00000110959.1	2476	No protein	-	<p>Alternatively spliced transcript that is believed to contain intronic sequence relative to other coding transcripts in a given locus.</p>Retained intron	-	-
Taf6l-003	OTTMUST00000110964.1	1567	No protein	-	<p>Alternatively spliced transcript that is believed to contain intronic sequence relative to other coding transcripts in a given locus.</p>Retained intron	-	-
Taf6l-008	OTTMUST00000110967.1	790	No protein	-	<p>Alternatively spliced transcript that is believed to contain intronic sequence relative to other coding transcripts in a given locus.</p>Retained intron	-	-
Taf6l-009	OTTMUST00000110966.1	649	No protein	-	<p>Alternatively spliced transcript that is believed to contain intronic sequence relative to other coding transcripts in a given locus.</p>Retained intron	-	-
Taf6l-011	OTTMUST00000110963.1	636	No protein	-	<p>Alternatively spliced transcript that is believed to contain intronic sequence relative to other coding transcripts in a given locus.</p>Retained intron	-	-

Summary

Statistics

Exons: 12 Transcript length: 2,167 bps Translation length: 623 residues

CCDS

This transcript is a member of the Mouse CCDS set: CCDS29546

Class

Known protein coding [Definition]

Author

This transcript was annotated by Havana

Version & date

Version 1, last modified on 10/03/2012 (Created on 08/09/2011)

Alternative symbols

RP23-62O7.3-004

Annotation Attributes

not organism-supported [Definitions]

Remarks

alternative 5' UTR

Other assemblies

This transcript maps to 8,774,492-8,786,257 in GRCm38 (Ensembl) coordinates.

Jump to this stable ID in Ensembl

Alternative transcripts

Ensembl transcript having exact match with Havana:	ENSMUST00000177216

Curation Method

Manual annotation from Havana

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Recent locations

Transcript: Taf6l-004 OTTMUST00000110960.1

Summary

Transcript-based displays