Description
Rho guanine nucleotide exchange factor (GEF) 40
Location
Chromosome 14: 51,984,864-52,005,622 forward strand.
About this transcript
This transcript has 24 exons and is annotated with 26 domains and features.
Gene
This transcript is a product of gene OTTMUSG00000043548 Show transcript tableHide transcript table
| Name | Transcript ID | bp | Protein | Translation ID | Biotype | CCDS | UniProt | Flags |
|---|---|---|---|---|---|---|---|---|
| Arhgef40-001 | OTTMUST00000114262.3 | 5621 | 1517aa | OTTMUSP00000063779 | <p>Genes and/or transcript that contains an open reading frame (ORF).</p>Protein coding | CCDS49488 | Q3UPH7 | |
| Arhgef40-003 | OTTMUST00000114264.1 | 5108 | 1517aa | OTTMUSP00000063780 | <p>Genes and/or transcript that contains an open reading frame (ORF).</p>Protein coding | CCDS49488 | Q3UPH7 | |
| Arhgef40-005 | OTTMUST00000114275.1 | 4843 | 1476aa | OTTMUSP00000063786 | <p>Genes and/or transcript that contains an open reading frame (ORF).</p>Protein coding | CCDS49489 | - | |
| Arhgef40-006 | OTTMUST00000114278.1 | 4756 | 1469aa | OTTMUSP00000063789 | <p>Genes and/or transcript that contains an open reading frame (ORF).</p>Protein coding | CCDS59616 | - | |
| Arhgef40-007 | OTTMUST00000114277.1 | 5130 | 1526aa | OTTMUSP00000063788 | <p>Genes and/or transcript that contains an open reading frame (ORF).</p>Protein coding | - | S4R189 | |
| Arhgef40-024 | OTTMUST00000114323.1 | 827 | 179aa | OTTMUSP00000063807 | <p>Genes and/or transcript that contains an open reading frame (ORF).</p>Protein coding | - | - | 5' truncation in transcript evidence prevents annotation of the start of the CDS.CDS 5' incomplete |
| Arhgef40-021 | OTTMUST00000114325.1 | 638 | 115aa | OTTMUSP00000063808 | <p>Genes and/or transcript that contains an open reading frame (ORF).</p>Protein coding | - | - | 5' truncation in transcript evidence prevents annotation of the start of the CDS.CDS 5' incomplete |
| Arhgef40-025 | OTTMUST00000114327.1 | 608 | 73aa | OTTMUSP00000063809 | <p>Genes and/or transcript that contains an open reading frame (ORF).</p>Protein coding | - | - | 5' truncation in transcript evidence prevents annotation of the start of the CDS.CDS 5' incomplete |
| Arhgef40-012 | OTTMUST00000114303.2 | 393 | 89aa | OTTMUSP00000063800 | <p>Genes and/or transcript that contains an open reading frame (ORF).</p>Protein coding | - | - | 3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete |
| Arhgef40-004 | OTTMUST00000114271.2 | 5320 | 1191aa | OTTMUSP00000063784 | Transcript is thought to undergo nonsense mediated decay, a process which detects nonsense mutations and prevents the expression of truncated or erroneous proteins. Nonsense mediated decay | - | S4R2U9 | |
| Arhgef40-008 | OTTMUST00000114276.1 | 4826 | 500aa | OTTMUSP00000063787 | Transcript is thought to undergo nonsense mediated decay, a process which detects nonsense mutations and prevents the expression of truncated or erroneous proteins. Nonsense mediated decay | - | - | |
| Arhgef40-017 | OTTMUST00000114321.1 | 822 | 45aa | OTTMUSP00000063806 | Transcript is thought to undergo nonsense mediated decay, a process which detects nonsense mutations and prevents the expression of truncated or erroneous proteins. Nonsense mediated decay | - | - | 5' truncation in transcript evidence prevents annotation of the start of the CDS.CDS 5' incomplete |
| Arhgef40-013 | OTTMUST00000114318.1 | 812 | 85aa | OTTMUSP00000063805 | Transcript is thought to undergo nonsense mediated decay, a process which detects nonsense mutations and prevents the expression of truncated or erroneous proteins. Nonsense mediated decay | - | - | |
| Arhgef40-011 | OTTMUST00000114302.1 | 751 | 44aa | OTTMUSP00000063799 | Transcript is thought to undergo nonsense mediated decay, a process which detects nonsense mutations and prevents the expression of truncated or erroneous proteins. Nonsense mediated decay | - | - | |
| Arhgef40-016 | OTTMUST00000114319.1 | 461 | No protein | - | <p>Transcripts that don't contain an open reading frame (ORF) and cannot be placed in one of the other categories.</p>Processed transcript | - | - | |
| Arhgef40-009 | OTTMUST00000114279.1 | 2903 | No protein | - | <p>Alternatively spliced transcript that is believed to contain intronic sequence relative to other coding transcripts in a given locus.</p>Retained intron | - | - | |
| Arhgef40-002 | OTTMUST00000114263.1 | 2191 | No protein | - | <p>Alternatively spliced transcript that is believed to contain intronic sequence relative to other coding transcripts in a given locus.</p>Retained intron | - | - | |
| Arhgef40-010 | OTTMUST00000114280.1 | 1429 | No protein | - | <p>Alternatively spliced transcript that is believed to contain intronic sequence relative to other coding transcripts in a given locus.</p>Retained intron | - | - | |
| Arhgef40-018 | OTTMUST00000114322.1 | 924 | No protein | - | <p>Alternatively spliced transcript that is believed to contain intronic sequence relative to other coding transcripts in a given locus.</p>Retained intron | - | - | |
| Arhgef40-014 | OTTMUST00000114317.1 | 848 | No protein | - | <p>Alternatively spliced transcript that is believed to contain intronic sequence relative to other coding transcripts in a given locus.</p>Retained intron | - | - | |
| Arhgef40-020 | OTTMUST00000114326.1 | 820 | No protein | - | <p>Alternatively spliced transcript that is believed to contain intronic sequence relative to other coding transcripts in a given locus.</p>Retained intron | - | - | |
| Arhgef40-023 | OTTMUST00000114329.1 | 676 | No protein | - | <p>Alternatively spliced transcript that is believed to contain intronic sequence relative to other coding transcripts in a given locus.</p>Retained intron | - | - | |
| Arhgef40-022 | OTTMUST00000114328.1 | 515 | No protein | - | <p>Alternatively spliced transcript that is believed to contain intronic sequence relative to other coding transcripts in a given locus.</p>Retained intron | - | - | |
| Arhgef40-026 | OTTMUST00000114330.1 | 478 | No protein | - | <p>Alternatively spliced transcript that is believed to contain intronic sequence relative to other coding transcripts in a given locus.</p>Retained intron | - | - | |
| Arhgef40-019 | OTTMUST00000114324.1 | 387 | No protein | - | <p>Alternatively spliced transcript that is believed to contain intronic sequence relative to other coding transcripts in a given locus.</p>Retained intron | - | - | |
| Arhgef40-015 | OTTMUST00000114320.1 | 336 | No protein | - | <p>Alternatively spliced transcript that is believed to contain intronic sequence relative to other coding transcripts in a given locus.</p>Retained intron | - | - |
