Transcript: Arhgef5-001 OTTMUST00000114331.1

Description

Rho guanine nucleotide exchange factor (GEF) 5

Location

Chromosome 6: 43,265,582-43,289,320 forward strand.

About this transcript

This transcript has 15 exons and is annotated with 26 domains and features.

Gene

This transcript is a product of gene OTTMUSG00000043554 Show transcript tableHide transcript table

Name	Transcript ID	bp	Protein	Translation ID	Biotype	CCDS	UniProt	Flags
Arhgef5-001	OTTMUST00000114331.1	5469	1581aa	OTTMUSP00000063810	<p>Genes and/or transcript that contains an open reading frame (ORF).</p>Protein coding	CCDS51759	E9Q7D5
Arhgef5-002	OTTMUST00000114332.1	2938	796aa	OTTMUSP00000063811	<p>Genes and/or transcript that contains an open reading frame (ORF).</p>Protein coding	-	S4R1F1	5' truncation in transcript evidence prevents annotation of the start of the CDS.CDS 5' incomplete
Arhgef5-005	OTTMUST00000114335.1	3098	No protein	-	<p>Alternatively spliced transcript that is believed to contain intronic sequence relative to other coding transcripts in a given locus.</p>Retained intron	-	-
Arhgef5-004	OTTMUST00000114334.1	2777	No protein	-	<p>Alternatively spliced transcript that is believed to contain intronic sequence relative to other coding transcripts in a given locus.</p>Retained intron	-	-
Arhgef5-006	OTTMUST00000114337.1	2319	No protein	-	<p>Alternatively spliced transcript that is believed to contain intronic sequence relative to other coding transcripts in a given locus.</p>Retained intron	-	-
Arhgef5-003	OTTMUST00000114333.1	598	No protein	-	<p>Alternatively spliced transcript that is believed to contain intronic sequence relative to other coding transcripts in a given locus.</p>Retained intron	-	-
Arhgef5-008	OTTMUST00000114338.1	573	No protein	-	<p>Alternatively spliced transcript that is believed to contain intronic sequence relative to other coding transcripts in a given locus.</p>Retained intron	-	-
Arhgef5-007	OTTMUST00000114336.1	519	No protein	-	<p>Alternatively spliced transcript that is believed to contain intronic sequence relative to other coding transcripts in a given locus.</p>Retained intron	-	-

Summary

Statistics

Exons: 15 Transcript length: 5,469 bps Translation length: 1,581 residues

CCDS

This transcript is a member of the Mouse CCDS set: CCDS51759

Class

Known protein coding [Definition]

Author

This transcript was annotated by Havana

Version & date

Version 1, last modified on 03/12/2012 (Created on 03/12/2012)

Alternative symbols

RP23-477L5.3-001

Annotation Attributes

not organism-supported [Definitions]

Remarks

NP_598435.1

Other assemblies

This transcript maps to 43,265,582-43,289,320 in GRCm38 (Ensembl) coordinates.

Jump to this stable ID in Ensembl

Alternative transcripts

Ensembl transcript having exact match with Havana:	ENSMUST00000031750

Curation Method

Manual annotation from Havana

Select a species

Recent locations

Transcript: Arhgef5-001 OTTMUST00000114331.1

Summary

Transcript-based displays