Transcript: Kdm5d-004 OTTMUST00000118912.1

Description

lysine (K)-specific demethylase 5D

Location

Chromosome Y: 897,788-917,605 forward strand.

About this transcript

This transcript has 10 exons and is annotated with 19 domains and features.

Gene

This transcript is a product of gene OTTMUSG00000045277 Show transcript tableHide transcript table

Name	Transcript ID	bp	Protein	Translation ID	Biotype	CCDS	UniProt
Kdm5d-001	OTTMUST00000118913.1	7974	1548aa	OTTMUSP00000066308	<p>Genes and/or transcript that contains an open reading frame (ORF).</p>Protein coding	CCDS30541	Q62240
Kdm5d-004	OTTMUST00000118912.1	2177	476aa	OTTMUSP00000066307	<p>Genes and/or transcript that contains an open reading frame (ORF).</p>Protein coding	-	Q8BQM3
Kdm5d-002	OTTMUST00000118916.1	5916	271aa	OTTMUSP00000066310	Transcript is thought to undergo nonsense mediated decay, a process which detects nonsense mutations and prevents the expression of truncated or erroneous proteins. Nonsense mediated decay	-	A0A087WR43
Kdm5d-003	OTTMUST00000118915.1	3708	691aa	OTTMUSP00000066309	Transcript is thought to undergo nonsense mediated decay, a process which detects nonsense mutations and prevents the expression of truncated or erroneous proteins. Nonsense mediated decay	-	-
Kdm5d-005	OTTMUST00000118914.1	4354	No protein	-	<p>Alternatively spliced transcript that is believed to contain intronic sequence relative to other coding transcripts in a given locus.</p>Retained intron	-	-
Kdm5d-008	OTTMUST00000118919.1	4037	No protein	-	<p>Alternatively spliced transcript that is believed to contain intronic sequence relative to other coding transcripts in a given locus.</p>Retained intron	-	-
Kdm5d-009	OTTMUST00000118920.1	2770	No protein	-	<p>Alternatively spliced transcript that is believed to contain intronic sequence relative to other coding transcripts in a given locus.</p>Retained intron	-	-
Kdm5d-006	OTTMUST00000118917.1	1821	No protein	-	<p>Alternatively spliced transcript that is believed to contain intronic sequence relative to other coding transcripts in a given locus.</p>Retained intron	-	-
Kdm5d-007	OTTMUST00000118918.1	696	No protein	-	<p>Alternatively spliced transcript that is believed to contain intronic sequence relative to other coding transcripts in a given locus.</p>Retained intron	-	-

Summary

Statistics

Exons: 10 Transcript length: 2,177 bps Translation length: 476 residues

Class

Putative protein coding [Definition]

Author

This transcript was annotated by Havana

Version & date

Version 1, last modified on 03/10/2013 (Created on 03/10/2013)

Alternative symbols

RP24-171E5.1-004

Other assemblies

This transcript maps to 897,788-917,605 in GRCm38 (Ensembl) coordinates.

Jump to this stable ID in Ensembl

Alternative transcripts

Ensembl transcript having exact match with Havana:	ENSMUST00000189069

Curation Method

Manual annotation from Havana

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Recent locations

Transcript: Kdm5d-004 OTTMUST00000118912.1

Summary

Transcript-based displays