Transcript: Slc40a1-007 OTTMUST00000121046.1

Description

solute carrier family 40 (iron-regulated transporter), member 1

Location

Chromosome 1: 45,921,217-45,926,519 reverse strand.

About this transcript

This transcript has 4 exons and is annotated with 4 domains and features.

Gene

This transcript is a product of gene OTTMUSG00000046528 Show transcript tableHide transcript table

Name	Transcript ID	bp	Protein	Translation ID	Biotype	CCDS	UniProt	Flags
Slc40a1-001	OTTMUST00000121040.2	3370	570aa	OTTMUSP00000066830	<p>Genes and/or transcript that contains an open reading frame (ORF).</p>Protein coding	CCDS14933	Q9JHI9
Slc40a1-005	OTTMUST00000121044.2	451	70aa	OTTMUSP00000066831	<p>Genes and/or transcript that contains an open reading frame (ORF).</p>Protein coding	-	C5H8V4	3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete
Slc40a1-007	OTTMUST00000121046.1	408	70aa	OTTMUSP00000066833	<p>Genes and/or transcript that contains an open reading frame (ORF).</p>Protein coding	-	C5H8V4	3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete
Slc40a1-006	OTTMUST00000121045.1	370	70aa	OTTMUSP00000066832	<p>Genes and/or transcript that contains an open reading frame (ORF).</p>Protein coding	-	C5H8V4	3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete
Slc40a1-002	OTTMUST00000121043.1	505	No protein	-	<p>Transcripts that don't contain an open reading frame (ORF) and cannot be placed in one of the other categories.</p>Processed transcript	-	-
Slc40a1-003	OTTMUST00000121042.1	263	No protein	-	<p>Transcripts that don't contain an open reading frame (ORF) and cannot be placed in one of the other categories.</p>Processed transcript	-	-
Slc40a1-004	OTTMUST00000121041.1	3928	No protein	-	<p>Alternatively spliced transcript that is believed to contain intronic sequence relative to other coding transcripts in a given locus.</p>Retained intron	-	-
Slc40a1-008	OTTMUST00000121047.1	2792	No protein	-	<p>Alternatively spliced transcript that is believed to contain intronic sequence relative to other coding transcripts in a given locus.</p>Retained intron	-	-

Summary

Statistics

Exons: 4 Transcript length: 408 bps Translation length: 70 residues

Class

Known protein coding [Definition]

Author

This transcript was annotated by Havana

Version & date

Version 1, last modified on 10/07/2015 (Created on 16/12/2013)

Alternative symbols

RP23-183P22.4-007

Remarks

alternative 5' UTR

non canonical TEC

CDS end not found

mRNA end not found

Other assemblies

This transcript maps to 45,921,217-45,926,519 in GRCm38 (Ensembl) coordinates.

Jump to this stable ID in Ensembl

Alternative transcripts

Ensembl transcript having exact match with Havana:	ENSMUST00000186804

Curation Method

Manual annotation from Havana

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Recent locations

Transcript: Slc40a1-007 OTTMUST00000121046.1

Summary

Transcript-based displays