Transcript: Clec18a-004 OTTMUST00000123057.1

Description

C-type lectin domain family 18, member A

Location

Chromosome 8: 111,058,920-111,082,088 reverse strand.

About this transcript

This transcript has 19 exons and is annotated with 23 domains and features.

Gene

This transcript is a product of gene OTTMUSG00000047805 Show transcript tableHide transcript table

Name	Transcript ID	bp	Protein	Translation ID	Biotype	CCDS	UniProt
Clec18a-007	OTTMUST00000123224.1	1998	534aa	OTTMUSP00000067347	<p>Genes and/or transcript that contains an open reading frame (ORF).</p>Protein coding	-	Q7TSQ1
Clec18a-003	OTTMUST00000123058.1	1973	473aa	OTTMUSP00000067308	<p>Genes and/or transcript that contains an open reading frame (ORF).</p>Protein coding	-	-
Clec18a-002	OTTMUST00000123060.1	2685	425aa	OTTMUSP00000067310	Transcript is thought to undergo nonsense mediated decay, a process which detects nonsense mutations and prevents the expression of truncated or erroneous proteins. Nonsense mediated decay	-	-
Clec18a-006	OTTMUST00000123055.2	2438	139aa	OTTMUSP00000067305	Transcript is thought to undergo nonsense mediated decay, a process which detects nonsense mutations and prevents the expression of truncated or erroneous proteins. Nonsense mediated decay	-	-
Clec18a-005	OTTMUST00000123056.1	2409	534aa	OTTMUSP00000067306	Transcript is thought to undergo nonsense mediated decay, a process which detects nonsense mutations and prevents the expression of truncated or erroneous proteins. Nonsense mediated decay	-	Q7TSQ1
Clec18a-004	OTTMUST00000123057.1	2319	504aa	OTTMUSP00000067307	Transcript is thought to undergo nonsense mediated decay, a process which detects nonsense mutations and prevents the expression of truncated or erroneous proteins. Nonsense mediated decay	-	-
Clec18a-001	OTTMUST00000123059.1	1878	129aa	OTTMUSP00000067309	Transcript is thought to undergo nonsense mediated decay, a process which detects nonsense mutations and prevents the expression of truncated or erroneous proteins. Nonsense mediated decay	-	-
Clec18a-008	OTTMUST00000152243.1	370	No protein	-	<p>Transcripts that don't contain an open reading frame (ORF) and cannot be placed in one of the other categories.</p>Processed transcript	-	-

Summary

Statistics

Exons: 19 Transcript length: 2,319 bps Translation length: 504 residues

Class

nonsense mediated decay [Definition]

Author

This transcript was annotated by Havana

Version & date

Version 1, last modified on 12/04/2016 (Created on 27/01/2014)

Alternative symbols

RP23-340N2.2-004

Remarks

non canonical TEC

Other assemblies

This transcript maps to 111,058,920-111,082,088 in GRCm38 (Ensembl) coordinates.

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Alternative transcripts

Ensembl transcript having exact match with Havana:	ENSMUST00000191030

Curation Method

Manual annotation from Havana

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Recent locations

Transcript: Clec18a-004 OTTMUST00000123057.1

Summary

Transcript-based displays