Transcript: Ptprn-005 OTTMUST00000124493.2

Description

protein tyrosine phosphatase, receptor type, N

Location

Chromosome 1: 75,258,491-75,263,907 reverse strand.

About this transcript

This transcript has 5 exons and is annotated with 6 domains and features.

Gene

This transcript is a product of gene OTTMUSG00000048596 Show transcript tableHide transcript table

Name	Transcript ID	bp	Protein	Translation ID	Biotype	CCDS	UniProt	Flags
Ptprn-001	OTTMUST00000124490.1	3554	981aa	OTTMUSP00000067723	<p>Genes and/or transcript that contains an open reading frame (ORF).</p>Protein coding	CCDS35625	A6MDD2
Ptprn-004	OTTMUST00000124494.1	512	170aa	OTTMUSP00000067725	<p>Genes and/or transcript that contains an open reading frame (ORF).</p>Protein coding	-	-	5' and 3' truncations in transcript evidence prevent annotation of the start and the end of the CDS.CDS 5' and 3' incomplete
Ptprn-005	OTTMUST00000124493.2	459	141aa	OTTMUSP00000067724	<p>Genes and/or transcript that contains an open reading frame (ORF).</p>Protein coding	-	-	3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete
Ptprn-003	OTTMUST00000124495.2	410	62aa	OTTMUSP00000067726	<p>Genes and/or transcript that contains an open reading frame (ORF).</p>Protein coding	-	-	3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete
Ptprn-002	OTTMUST00000124491.1	1592	No protein	-	<p>Error in the sequence in a public database (for example UniProtKB, NCBI RefSeq). Annotation is by the <a rel="external" href="http://vega.sanger.ac.uk/info/about/gene_and_transcript_types.html">VEGA/Havana</a> project.</p>Artifact	-	-
Ptprn-006	OTTMUST00000124496.1	425	No protein	-	<p>Transcripts that don't contain an open reading frame (ORF) and cannot be placed in one of the other categories.</p>Processed transcript	-	-
Ptprn-007	OTTMUST00000124492.1	728	No protein	-	<p>Alternatively spliced transcript that is believed to contain intronic sequence relative to other coding transcripts in a given locus.</p>Retained intron	-	-

Summary

Statistics

Exons: 5 Transcript length: 459 bps Translation length: 141 residues

Class

Putative protein coding [Definition]

Author

This transcript was annotated by Havana

Version & date

Version 2, last modified on 10/07/2015 (Created on 13/02/2014)

Alternative symbols

RP23-321N22.10-005

Remarks

CDS end not found

mRNA end not found

Other assemblies

This transcript maps to 75,258,491-75,263,907 in GRCm38 (Ensembl) coordinates.

Jump to this stable ID in Ensembl

Alternative transcripts

Ensembl transcript having exact match with Havana:	ENSMUST00000186178

Curation Method

Manual annotation from Havana

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Recent locations

Transcript: Ptprn-005 OTTMUST00000124493.2

Summary

Transcript-based displays