Transcript: Pcdh7-003 OTTMUST00000129081.3

Description

protocadherin 7

Location

Chromosome 5: 57,718,020-57,729,465 forward strand.

About this transcript

This transcript has 2 exons and is annotated with 65 domains and features.

Gene

This transcript is a product of gene OTTMUSG00000050929 Show transcript tableHide transcript table

Name	Transcript ID	bp	Protein	Translation ID	Biotype	CCDS	UniProt	Flags
Pcdh7-001	OTTMUST00000129080.3	8785	1255aa	OTTMUSP00000069380	<p>Genes and/or transcript that contains an open reading frame (ORF).</p>Protein coding	CCDS51505	A0A0A6YY83
Pcdh7-003	OTTMUST00000129081.3	5611	1069aa	OTTMUSP00000069381	<p>Genes and/or transcript that contains an open reading frame (ORF).</p>Protein coding	CCDS19296	A2RS43
Pcdh7-002	OTTMUST00000129082.4	3752	1247aa	OTTMUSP00000069382	<p>Genes and/or transcript that contains an open reading frame (ORF).</p>Protein coding	CCDS80286	E9Q2S0
Pcdh7-004	OTTMUST00000129088.1	2602	802aa	OTTMUSP00000069384	<p>Genes and/or transcript that contains an open reading frame (ORF).</p>Protein coding	-	A0A0A6YY48	5' truncation in transcript evidence prevents annotation of the start of the CDS.CDS 5' incomplete
Pcdh7-006	OTTMUST00000129090.1	863	125aa	OTTMUSP00000069386	<p>Genes and/or transcript that contains an open reading frame (ORF).</p>Protein coding	-	A0A0A6YWD5	5' truncation in transcript evidence prevents annotation of the start of the CDS.CDS 5' incomplete
Pcdh7-007	OTTMUST00000136922.1	659	171aa	OTTMUSP00000072183	<p>Genes and/or transcript that contains an open reading frame (ORF).</p>Protein coding	-	A0A0G2JG16
Pcdh7-005	OTTMUST00000129089.2	2199	379aa	OTTMUSP00000069385	Transcript is thought to undergo nonsense mediated decay, a process which detects nonsense mutations and prevents the expression of truncated or erroneous proteins. Nonsense mediated decay	-	A0A0A6YW34	5' truncation in transcript evidence prevents annotation of the start of the CDS.CDS 5' incomplete

Summary

Statistics

Exons: 2 Transcript length: 5,611 bps Translation length: 1,069 residues

CCDS

This transcript is a member of the Mouse CCDS set: CCDS19296

Class

Known protein coding [Definition]

Author

This transcript was annotated by Havana

Version & date

Version 3, last modified on 03/12/2014 (Created on 02/06/2014)

Alternative symbols

RP24-340K5.1-003

Annotation Attributes

3' standard supported extension [Definitions]

Other assemblies

This transcript maps to 57,718,020-57,729,465 in GRCm38 (Ensembl) coordinates.

Jump to this stable ID in Ensembl

Alternative transcripts

Ensembl transcript having exact match with Havana:	ENSMUST00000068110

Curation Method

Manual annotation from Havana

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Recent locations

Transcript: Pcdh7-003 OTTMUST00000129081.3

Summary

Transcript-based displays