Transcript: Pcdh9-003 OTTMUST00000129106.3

Description

protocadherin 9

Location

About this transcript

This transcript has 2 exons and is annotated with 54 domains and features.

Gene

Name	Transcript ID	bp	Protein	Translation ID	Biotype	CCDS	UniProt	Flags
Pcdh9-001	OTTMUST00000129100.1	6521	1237aa	OTTMUSP00000069389	<p>Genes and/or transcript that contains an open reading frame (ORF).</p>Protein coding	CCDS36992	F8VPK8
Pcdh9-004	OTTMUST00000129101.1	6127	1203aa	OTTMUSP00000069390	<p>Genes and/or transcript that contains an open reading frame (ORF).</p>Protein coding	CCDS79350	A0A0A6YWY8
Pcdh9-006	OTTMUST00000129102.1	5161	1038aa	OTTMUSP00000069391	<p>Genes and/or transcript that contains an open reading frame (ORF).</p>Protein coding	CCDS79352	A0A0A6YY37
Pcdh9-005	OTTMUST00000129103.1	5096	1195aa	OTTMUSP00000069392	<p>Genes and/or transcript that contains an open reading frame (ORF).</p>Protein coding	-	A0A0A6YY09
Pcdh9-003	OTTMUST00000129106.3	3014	873aa	OTTMUSP00000069394	<p>Genes and/or transcript that contains an open reading frame (ORF).</p>Protein coding	-	A0A0A6YWM0	3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete
Pcdh9-007	OTTMUST00000129104.1	354	85aa	OTTMUSP00000069393	<p>Genes and/or transcript that contains an open reading frame (ORF).</p>Protein coding	-	A0A0A6YVP5	5' truncation in transcript evidence prevents annotation of the start of the CDS.CDS 5' incomplete
Pcdh9-002	OTTMUST00000129105.1	656	No protein	-	<p>Alternatively spliced transcript that is believed to contain intronic sequence relative to other coding transcripts in a given locus.</p>Retained intron	-	-

Summary

Statistics

Exons: 2 Transcript length: 3,014 bps Translation length: 873 residues

Class

Known protein coding [Definition]

Author

This transcript was annotated by Havana

Version & date

Version 3, last modified on 19/08/2015 (Created on 03/06/2014)

Alternative symbols

RP24-555D20.1-003

Annotation Attributes

not organism-supported [Definitions]

Remarks

alternative 5' UTR

CDS end not found

mRNA end not found

Other assemblies

This transcript maps to 93,886,113-93,890,679 in GRCm38 (Ensembl) coordinates.

Jump to this stable ID in Ensembl

Alternative transcripts

Ensembl transcript having exact match with Havana:	ENSMUST00000194056

Curation Method

Manual annotation from Havana