Transcript: Pdgfra-001 OTTMUST00000138650.2

Description

platelet derived growth factor receptor, alpha polypeptide

Location

Chromosome 5: 75,152,306-75,198,215 forward strand.

About this transcript

This transcript has 23 exons and is annotated with 49 domains and features.

Gene

This transcript is a product of gene OTTMUSG00000056081 Show transcript tableHide transcript table

Name	Transcript ID	bp	Protein	Translation ID	Biotype	CCDS	UniProt	Flags
Pdgfra-006	OTTMUST00000138655.2	6834	1089aa	OTTMUSP00000072854	<p>Genes and/or transcript that contains an open reading frame (ORF).</p>Protein coding	CCDS19351	P26618
Pdgfra-001	OTTMUST00000138650.2	6549	1089aa	OTTMUSP00000072850	<p>Genes and/or transcript that contains an open reading frame (ORF).</p>Protein coding	CCDS19351	P26618
Pdgfra-003	OTTMUST00000138652.1	4088	790aa	OTTMUSP00000072852	<p>Genes and/or transcript that contains an open reading frame (ORF).</p>Protein coding	-	-
Pdgfra-002	OTTMUST00000138649.1	2876	790aa	OTTMUSP00000072849	<p>Genes and/or transcript that contains an open reading frame (ORF).</p>Protein coding	-	-
Pdgfra-007	OTTMUST00000138657.2	1138	243aa	OTTMUSP00000072856	<p>Genes and/or transcript that contains an open reading frame (ORF).</p>Protein coding	-	A0A0J9YVF3	3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete
Pdgfra-008	OTTMUST00000138656.2	615	139aa	OTTMUSP00000072855	<p>Genes and/or transcript that contains an open reading frame (ORF).</p>Protein coding	-	A0A0J9YUD9	3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete
Pdgfra-009	OTTMUST00000138654.2	442	88aa	OTTMUSP00000072853	<p>Genes and/or transcript that contains an open reading frame (ORF).</p>Protein coding	-	A0A0J9YV49	3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete
Pdgfra-005	OTTMUST00000138651.2	1561	481aa	OTTMUSP00000072851	Non stop decay	-	A0A0J9YV87
Pdgfra-004	OTTMUST00000138653.2	603	No protein	-	<p>Alternatively spliced transcript that is believed to contain intronic sequence relative to other coding transcripts in a given locus.</p>Retained intron	-	-

Summary

Statistics

Exons: 23 Transcript length: 6,549 bps Translation length: 1,089 residues

CCDS

This transcript is a member of the Mouse CCDS set: CCDS19351

Class

Known protein coding [Definition]

Author

This transcript was annotated by Havana

Version & date

Version 2, last modified on 24/02/2015 (Created on 05/02/2015)

Alternative symbols

RP23-55P22.4-001

Other assemblies

This transcript maps to 75,152,306-75,198,215 in GRCm38 (Ensembl) coordinates.

Jump to this stable ID in Ensembl

Alternative transcripts

Ensembl transcript having exact match with Havana:	ENSMUST00000000476

Curation Method

Manual annotation from Havana

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Recent locations

Transcript: Pdgfra-001 OTTMUST00000138650.2

Summary

Transcript-based displays