Transcript: Aplf-004 OTTMUST00000140847.1

Description

aprataxin and PNKP like factor

Location

About this transcript

This transcript has 10 exons and is annotated with 1 domain and feature.

Gene

Name	Transcript ID	bp	Protein	Translation ID	Biotype	CCDS	UniProt
Aplf-001	OTTMUST00000140846.1	3132	478aa	OTTMUSP00000073697	<p>Genes and/or transcript that contains an open reading frame (ORF).</p>Protein coding	CCDS20324	-
Aplf-002	OTTMUST00000140848.1	1889	499aa	OTTMUSP00000073699	<p>Genes and/or transcript that contains an open reading frame (ORF).</p>Protein coding	CCDS51839	Q9D842
Aplf-004	OTTMUST00000140847.1	1587	44aa	OTTMUSP00000073698	Transcript is thought to undergo nonsense mediated decay, a process which detects nonsense mutations and prevents the expression of truncated or erroneous proteins. Nonsense mediated decay	-	A0A0N4SW39
Aplf-003	OTTMUST00000140849.1	3588	No protein	-	<p>Alternatively spliced transcript that is believed to contain intronic sequence relative to other coding transcripts in a given locus.</p>Retained intron	-	-

Summary

Statistics

Exons: 10 Transcript length: 1,587 bps Translation length: 44 residues

Class

nonsense mediated decay [Definition]

Author

This transcript was annotated by Havana

Version & date

Version 1, last modified on 29/04/2015 (Created on 29/04/2015)

Alternative symbols

RP24-475M20.3-004

Other assemblies

This transcript maps to 87,629,744-87,672,064 in GRCm38 (Ensembl) coordinates.

Jump to this stable ID in Ensembl

Alternative transcripts

Ensembl transcript having exact match with Havana:	ENSMUST00000203209

Curation Method

Manual annotation from Havana