Transcript: Pik3c2a-003 OTTMUST00000144375.1

Description

phosphatidylinositol 3-kinphosphatidylinositol 3-kinase, C2 domain containing, alpha polypeptidease, C2 domain containing, alpha polypeptide

Location

Chromosome 7: 116,388,076-116,443,447 reverse strand.

About this transcript

This transcript has 6 exons and is annotated with 3 domains and features.

Gene

This transcript is a product of gene OTTMUSG00000058790 Show transcript tableHide transcript table

Name	Transcript ID	bp	Protein	Translation ID	Biotype	CCDS	UniProt	Flags
Pik3c2a-001	OTTMUST00000144368.2	8044	1686aa	OTTMUSP00000075255	<p>Genes and/or transcript that contains an open reading frame (ORF).</p>Protein coding	CCDS52371	F8VPL2
Pik3c2a-002	OTTMUST00000144373.1	5670	1686aa	OTTMUSP00000075257	<p>Genes and/or transcript that contains an open reading frame (ORF).</p>Protein coding	CCDS52371	F8VPL2
Pik3c2a-005	OTTMUST00000144372.1	2830	448aa	OTTMUSP00000075256	Transcript is thought to undergo nonsense mediated decay, a process which detects nonsense mutations and prevents the expression of truncated or erroneous proteins. Nonsense mediated decay	-	A0A0U1RNT0	5' truncation in transcript evidence prevents annotation of the start of the CDS.CDS 5' incomplete
Pik3c2a-003	OTTMUST00000144375.1	1710	364aa	OTTMUSP00000075258	Transcript is thought to undergo nonsense mediated decay, a process which detects nonsense mutations and prevents the expression of truncated or erroneous proteins. Nonsense mediated decay	-	A0A0U1RNH9
Pik3c2a-004	OTTMUST00000144376.1	3849	No protein	-	<p>Alternatively spliced transcript that is believed to contain intronic sequence relative to other coding transcripts in a given locus.</p>Retained intron	-	-
Pik3c2a-007	OTTMUST00000144371.1	3354	No protein	-	<p>Alternatively spliced transcript that is believed to contain intronic sequence relative to other coding transcripts in a given locus.</p>Retained intron	-	-
Pik3c2a-006	OTTMUST00000144374.1	741	No protein	-	<p>Alternatively spliced transcript that is believed to contain intronic sequence relative to other coding transcripts in a given locus.</p>Retained intron	-	-

Summary

Statistics

Exons: 6 Transcript length: 1,710 bps Translation length: 364 residues

Class

nonsense mediated decay [Definition]

Author

This transcript was annotated by Havana

Version & date

Version 1, last modified on 29/07/2015 (Created on 29/07/2015)

Alternative symbols

RP23-335G1.3-003

Other assemblies

This transcript maps to 116,388,076-116,443,447 in GRCm38 (Ensembl) coordinates.

Jump to this stable ID in Ensembl

Alternative transcripts

Ensembl transcript having exact match with Havana:	ENSMUST00000205378

Curation Method

Manual annotation from Havana

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Recent locations

Transcript: Pik3c2a-003 OTTMUST00000144375.1

Summary

Transcript-based displays