Transcript: Umod-005 OTTMUST00000144964.1

Description

uromodulin

Location

About this transcript

This transcript has 5 exons and is annotated with 5 domains and features.

Gene

Name	Transcript ID	bp	Protein	Translation ID	Biotype	CCDS	UniProt	Flags
Umod-001	OTTMUST00000144963.1	2625	642aa	OTTMUSP00000075518	<p>Genes and/or transcript that contains an open reading frame (ORF).</p>Protein coding	CCDS21780	Q91X17
Umod-002	OTTMUST00000144962.1	2571	642aa	OTTMUSP00000075517	<p>Genes and/or transcript that contains an open reading frame (ORF).</p>Protein coding	CCDS21780	Q91X17
Umod-004	OTTMUST00000144966.1	759	187aa	OTTMUSP00000075520	<p>Genes and/or transcript that contains an open reading frame (ORF).</p>Protein coding	-	A0A140LI10	3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete
Umod-003	OTTMUST00000144967.1	419	87aa	OTTMUSP00000075521	<p>Genes and/or transcript that contains an open reading frame (ORF).</p>Protein coding	-	A0A140LJ95	3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete
Umod-005	OTTMUST00000144964.1	525	77aa	OTTMUSP00000075519	Transcript is thought to undergo nonsense mediated decay, a process which detects nonsense mutations and prevents the expression of truncated or erroneous proteins. Nonsense mediated decay	-	A0A140LJ15	5' truncation in transcript evidence prevents annotation of the start of the CDS.CDS 5' incomplete
Umod-006	OTTMUST00000144965.1	584	No protein	-	<p>Transcripts that don't contain an open reading frame (ORF) and cannot be placed in one of the other categories.</p>Processed transcript	-	-

Summary

Statistics

Exons: 5 Transcript length: 525 bps Translation length: 77 residues

Class

nonsense mediated decay [Definition]

Author

This transcript was annotated by Havana

Version & date

Version 1, last modified on 13/08/2015 (Created on 13/08/2015)

Alternative symbols

RP24-350A15.5-005

Remarks

CDS start not found

mRNA start not found

Other assemblies

This transcript maps to 119,472,380-119,478,213 in GRCm38 (Ensembl) coordinates.

Jump to this stable ID in Ensembl

Alternative transcripts

Ensembl transcript having exact match with Havana:	ENSMUST00000207378

Curation Method

Manual annotation from Havana