Transcript: RP23-78N8.3-002 OTTMUST00000146573.1

Description

novel protein

Location

About this transcript

This transcript has 6 exons and is annotated with 4 domains and features.

Gene

Name	Transcript ID	bp	Protein	Translation ID	Biotype	CCDS	UniProt	Flags
RP23-78N8.3-001	OTTMUST00000146572.1	6773	444aa	OTTMUSP00000076291	<p>Genes and/or transcript that contains an open reading frame (ORF).</p>Protein coding	CCDS40159	Q9D2Q3
RP23-78N8.3-003	OTTMUST00000146575.1	739	228aa	OTTMUSP00000076293	<p>Genes and/or transcript that contains an open reading frame (ORF).</p>Protein coding	-	A0A140LJK0	3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete
RP23-78N8.3-004	OTTMUST00000146576.1	418	139aa	OTTMUSP00000076294	<p>Genes and/or transcript that contains an open reading frame (ORF).</p>Protein coding	-	A0A140LIF3	5' and 3' truncations in transcript evidence prevent annotation of the start and the end of the CDS.CDS 5' and 3' incomplete
RP23-78N8.3-002	OTTMUST00000146573.1	3703	367aa	OTTMUSP00000076292	Transcript is thought to undergo nonsense mediated decay, a process which detects nonsense mutations and prevents the expression of truncated or erroneous proteins. Nonsense mediated decay	-	A0A140LJB8
RP23-78N8.3-005	OTTMUST00000146577.1	353	No protein	-	<p>Transcripts that don't contain an open reading frame (ORF) and cannot be placed in one of the other categories.</p>Processed transcript	-	-
RP23-78N8.3-006	OTTMUST00000146574.1	5386	No protein	-	<p>Alternatively spliced transcript that is believed to contain intronic sequence relative to other coding transcripts in a given locus.</p>Retained intron	-	-

Summary

Statistics

Exons: 6 Transcript length: 3,703 bps Translation length: 367 residues

Class

nonsense mediated decay [Definition]

Author

This transcript was annotated by Havana

Version & date

Version 1, last modified on 02/10/2015 (Created on 02/10/2015)

Other assemblies

This transcript maps to 131,343,186-131,362,696 in GRCm38 (Ensembl) coordinates.

Jump to this stable ID in Ensembl

Alternative transcripts

Ensembl transcript having exact match with Havana:	ENSMUST00000208526

Curation Method

Manual annotation from Havana